RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TNFRSF10BO14763 440 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 ABL1P00519 1130 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 EPB41P11171 864 aaKnown RBP17.06■□□□□ 0.32
USE1-201ENST00000263897 CXCL12P48061 93 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 FKBP3Q00688 224 aaKnown RBP17.06■□□□□ 0.32
USE1-201ENST00000263897 INCA1Q0VD86 236 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 USP4Q13107 963 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 ORC1Q13415 861 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 CCINQ13939 588 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 ADSSL1Q8N142 457 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 SYNPOQ8N3V7 929 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 ZBTB44Q8NCP5 570 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 TTC16Q8NEE8 873 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 ATRIPQ8WXE1 791 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 TSG101Q99816 390 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 FAM126AQ9BYI3 521 aaPredicted RBP17.06■□□□□ 0.32
USE1-201ENST00000263897 DMAP1Q9NPF5 467 aaPredicted RBP17.06■□□□□ 0.32
USE1-201ENST00000263897 ZSCAN32Q9NX65 697 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 DUS2Q9NX74 493 aaKnown RBP17.06■□□□□ 0.32
USE1-201ENST00000263897 PCDHGA2Q9Y5H1 932 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 MYH10P35580 1976 aa17.06■□□□□ 0.32
USE1-201ENST00000263897 OTOGLQ3ZCN5 2332 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 GPR179Q6PRD1 2367 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 TRDMT1O14717 391 aaKnown RBP17.05■□□□□ 0.32
USE1-201ENST00000263897 STX10O60499 249 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 AP1G2O75843 785 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 TDGF1P13385 188 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 CCDC130P13994 396 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 CCR3P51677 355 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 PMS1P54277 932 aaKnown RBP17.05■□□□□ 0.32
USE1-201ENST00000263897 SLC7A9P82251 487 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 ZXDBP98169 803 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 AMPD2Q01433 879 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 IFRD2Q12894 506 aaPredicted RBP17.05■□□□□ 0.32
USE1-201ENST00000263897 PPP2R5DQ14738 602 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 ZC3H3Q8IXZ2 948 aaKnown RBP17.05■□□□□ 0.32
USE1-201ENST00000263897 C12orf29Q8N999 325 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 CCDC150Q8NCX0 1101 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 PDZD8Q8NEN9 1154 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 ZMIZ2Q8NF64 920 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 SCAMP5Q8TAC9 235 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 SLC2A14Q8TDB8 520 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 OVCA2Q8WZ82 227 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 SEMA4DQ92854 862 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 CHFRQ96EP1 664 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 SMOQ99835 787 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 NIF3L1Q9GZT8 377 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 LINC00597Q9H2U6 94 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 ECT2Q9H8V3 914 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 CSNK1G1Q9HCP0 422 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 COMMD8Q9NX08 183 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 CHORDC1Q9UHD1 332 aaPredicted RBP17.05■□□□□ 0.32
USE1-201ENST00000263897 CIZ1Q9ULV3 898 aaPredicted RBP17.05■□□□□ 0.32
USE1-201ENST00000263897 SPTBN4Q9H254 2564 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 USP34Q70CQ2 3546 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 ZNF292O60281 2723 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 ATG2BQ96BY7 2078 aa17.05■□□□□ 0.32
USE1-201ENST00000263897 FAM92AA1XBS5 289 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 LEFTY2O00292 366 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 KINO60870 393 aaKnown RBP17.04■□□□□ 0.32
USE1-201ENST00000263897 LILRB5O75023 590 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 BEST1O76090 585 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 OLFM2O95897 454 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 OAS1P00973 400 aaKnown RBP17.04■□□□□ 0.32
USE1-201ENST00000263897 TRIM21P19474 475 aaKnown RBP17.04■□□□□ 0.32
USE1-201ENST00000263897 GJA4P35212 333 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 IFNAR2P48551 515 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 GALK1P51570 392 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 NRLP54845 237 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 LRRC63Q05C16 580 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 EML3Q32P44 896 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 TMEM196Q5HYL7 178 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 SNX30Q5VWJ9 437 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 ISM2Q6H9L7 571 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 CPA6Q8N4T0 437 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 KIAA1958Q8N8K9 716 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 SUMF1Q8NBK3 374 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 FBXL13Q8NEE6 735 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 WHAMMQ8TF30 809 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 ATP2A3Q93084 1043 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 FBXO32Q969P5 355 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 FAXDC2Q96IV6 333 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 TWNKQ96RR1 684 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 HNRNPABQ99729 332 aaKnown RBP17.04■□□□□ 0.32
USE1-201ENST00000263897 NT5C1AQ9BXI3 368 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 KRT82Q9NSB4 513 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 FAM49BQ9NUQ9 324 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 RAB20Q9NX57 234 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 WNT6Q9Y6F9 365 aa17.04■□□□□ 0.32
USE1-201ENST00000263897 SLC16A3O15427 465 aaKnown RBP17.03■□□□□ 0.32
USE1-201ENST00000263897 GADD45BO75293 160 aaPredicted RBP17.03■□□□□ 0.32
USE1-201ENST00000263897 CILPO75339 1184 aa17.03■□□□□ 0.32
USE1-201ENST00000263897 MXI1P50539 228 aa17.03■□□□□ 0.32
USE1-201ENST00000263897 SLC5A3P53794 718 aa17.03■□□□□ 0.32
USE1-201ENST00000263897 SATB1Q01826 763 aa17.03■□□□□ 0.32
USE1-201ENST00000263897 GRSF1Q12849 480 aaKnown RBP eCLIP17.03■□□□□ 0.32
USE1-201ENST00000263897 NR1H3Q13133 447 aa17.03■□□□□ 0.32
USE1-201ENST00000263897 FSTL4Q6MZW2 842 aa17.03■□□□□ 0.32
USE1-201ENST00000263897 Q6ZS52 159 aa17.03■□□□□ 0.32
USE1-201ENST00000263897 CYFIP2Q96F07 1278 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms