RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 VCXQ9H320 206 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 MAP3K7O43318 606 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 GJB1P08034 283 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 ROR1Q01973 937 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 SP2Q02086 613 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 CTC1Q2NKJ3 1217 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 NKD2Q969F2 451 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-201ENST00000263856 CCDC124Q96CT7 223 aaKnown RBP12.93□□□□□ -0.34
CHMP3-201ENST00000263856 NLRP4Q96MN2 994 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 NIF3L1Q9GZT8 377 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 FARP1Q9Y4F1 1045 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-201ENST00000263856 SNCAIPQ9Y6H5 919 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 TM9SF1O15321 606 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 LDHAP00338 332 aaKnown RBP12.93□□□□□ -0.34
CHMP3-201ENST00000263856 MIPP30301 263 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 GRIK3Q13003 919 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 DPYSL3Q14195 570 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 KRT81Q14533 505 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 C15orf59Q2T9L4 293 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-201ENST00000263856 PPP6R3Q5H9R7 873 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-201ENST00000263856 CASC4Q6P4E1 433 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 TTLL6Q8N841 843 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 APOPT1Q96IL0 206 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 ZNF333Q96JL9 665 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 CPXM1Q96SM3 734 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 ASCC2Q9H1I8 757 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-201ENST00000263856 C2CD2Q9Y426 696 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 KIAA1217Q5T5P2 1943 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 H0YCG3 227 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 M0QYV0 167 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 PLA2G6O60733 806 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 LMNAP02545 664 aaKnown RBP12.93□□□□□ -0.34
CHMP3-201ENST00000263856 KRT7P08729 469 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 SP100P23497 879 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-201ENST00000263856 CALRP27797 417 aaKnown RBP12.93□□□□□ -0.34
CHMP3-201ENST00000263856 POLR2BP30876 1174 aaKnown RBP12.93□□□□□ -0.34
CHMP3-201ENST00000263856 EPHB1P54762 984 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 AQP5P55064 265 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 C1orf146Q5VVC0 180 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 SLC30A9Q6PML9 568 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 RGS9BPQ6ZS82 235 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 POU5F2Q8N7G0 328 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 NETO2Q8NC67 525 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 SMC1BQ8NDV3 1235 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 JDP2Q8WYK2 163 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 CYP4F11Q9HBI6 524 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 NGRNQ9NPE2 291 aaKnown RBP12.93□□□□□ -0.34
CHMP3-201ENST00000263856 CYLDQ9NQC7 956 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 SAR1AQ9NR31 198 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 CYTH4Q9UIA0 394 aa12.93□□□□□ -0.34
CHMP3-201ENST00000263856 MYO18AQ92614 2054 aaKnown RBP12.92□□□□□ -0.34
CHMP3-201ENST00000263856 A6NHS1 94 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 CXorf49A8MYA2 514 aaPredicted RBP12.92□□□□□ -0.34
CHMP3-201ENST00000263856 INO80B-WBP1J3KQ70 363 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 CIB2O75838 187 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 OATP04181 439 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 SUPT20HL2P0C7V6 817 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 RGS7P49802 495 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 NEK3P51956 506 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 TGFB2P61812 414 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 SLC34A1Q06495 639 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 BST1Q10588 318 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 CAPSQ13938 189 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 SUPT20HL1Q3ZLR7 823 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 AP1ARQ63HQ0 302 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 ARFGAP1Q8N6T3 406 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 EFCAB3Q8N7B9 438 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 RNF149Q8NC42 400 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 GPRASP2Q96D09 838 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 ADPGKQ9BRR6 497 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 INO80BQ9C086 356 aaPredicted RBP12.92□□□□□ -0.34
CHMP3-201ENST00000263856 VPS11Q9H270 941 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 MTO1Q9Y2Z2 717 aaKnown RBP12.92□□□□□ -0.34
CHMP3-201ENST00000263856 NR2E3Q9Y5X4 410 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 A0A0B4J269 797 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 STBD1O95210 358 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 ACADSP16219 412 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 UBAP2LQ14157 1087 aaKnown RBP12.92□□□□□ -0.34
CHMP3-201ENST00000263856 CFAP157Q5JU67 520 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 C6orf163Q5TEZ5 329 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 OR6B2Q6IFH4 312 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 TRIM50Q86XT4 487 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 NUDCD3Q8IVD9 361 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 CCDC110Q8TBZ0 833 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 TMEM174Q8WUU8 243 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 PRPF31Q8WWY3 499 aaKnown RBP12.92□□□□□ -0.34
CHMP3-201ENST00000263856 LPAR1Q92633 364 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 APOL6Q9BWW8 343 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 PAPOLBQ9NRJ5 636 aaKnown RBP12.92□□□□□ -0.34
CHMP3-201ENST00000263856 ZC3H7BQ9UGR2 993 aaKnown RBP12.92□□□□□ -0.34
CHMP3-201ENST00000263856 CNTNAP2Q9UHC6 1331 aa12.92□□□□□ -0.34
CHMP3-201ENST00000263856 ASS1P00966 412 aaKnown RBP12.91□□□□□ -0.34
CHMP3-201ENST00000263856 CNTN2Q02246 1040 aa12.91□□□□□ -0.34
CHMP3-201ENST00000263856 DUOXA2Q1HG44 320 aa12.91□□□□□ -0.34
CHMP3-201ENST00000263856 CIAPIN1Q6FI81 312 aa12.91□□□□□ -0.34
CHMP3-201ENST00000263856 STYK1Q6J9G0 422 aa12.91□□□□□ -0.34
CHMP3-201ENST00000263856 DRICH1Q6PGQ1 229 aaPredicted RBP12.91□□□□□ -0.34
CHMP3-201ENST00000263856 TREML1Q86YW5 311 aa12.91□□□□□ -0.34
CHMP3-201ENST00000263856 CCNJLQ8IV13 435 aa12.91□□□□□ -0.34
CHMP3-201ENST00000263856 ENDOVQ8N8Q3 282 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms