RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 ARL13BQ3SXY8 428 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 CYFIP1Q7L576 1253 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 MYO1HQ8N1T3 1032 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 PLEKHO2Q8TD55 490 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 SLX1AQ9BQ83 275 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 TEX13BQ9BXU2 312 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 MRPL9Q9BYD2 267 aaKnown RBP8.7□□□□□ -1.02
LDB3-201ENST00000263066 PRDM5Q9NQX1 630 aaPredicted RBP8.7□□□□□ -1.02
LDB3-201ENST00000263066 ARL8BQ9NVJ2 186 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 STMN3Q9NZ72 180 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 TBC1D14Q9P2M4 693 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 ANAPC5Q9UJX4 755 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 DNAH12Q6ZR08 3092 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 USP34Q70CQ2 3546 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 ZNF862O60290 1169 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 CDH16O75309 829 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 USP12O75317 370 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 MMP1P03956 469 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 MYL3P08590 195 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 PLS3P13797 630 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 ATF2P15336 505 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 CTNNA2P26232 953 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 LONP1P36776 959 aaKnown RBP8.7□□□□□ -1.02
LDB3-201ENST00000263066 TPD52P55327 224 aaPredicted RBP8.7□□□□□ -1.02
LDB3-201ENST00000263066 JAG1P78504 1218 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 SPIDRQ14159 915 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 SBK1Q52WX2 424 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 BRDTQ58F21 947 aaPredicted RBP8.7□□□□□ -1.02
LDB3-201ENST00000263066 DEPDC1Q5TB30 811 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 LLGL2Q6P1M3 1020 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 PDXDC2PQ6P474 469 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 C4orf22Q6V702 233 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 PASD1Q8IV76 773 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 TAB3Q8N5C8 712 aaPredicted RBP8.7□□□□□ -1.02
LDB3-201ENST00000263066 TNIP2Q8NFZ5 429 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 NACC2Q96BF6 587 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 NLRP4Q96MN2 994 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 CCDC177Q9NQR7 707 aaPredicted RBP8.7□□□□□ -1.02
LDB3-201ENST00000263066 STRIP2Q9ULQ0 834 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 SPEF2Q9C093 1822 aa8.7□□□□□ -1.02
LDB3-201ENST00000263066 ZC3H11AO75152 810 aaKnown RBP eCLIP8.69□□□□□ -1.02
LDB3-201ENST00000263066 CSDE1O75534 798 aaKnown RBP8.69□□□□□ -1.02
LDB3-201ENST00000263066 CTSHP09668 335 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 NKX2-5P52952 324 aaPredicted RBP8.69□□□□□ -1.02
LDB3-201ENST00000263066 RRP1BQ14684 758 aaKnown RBP8.69□□□□□ -1.02
LDB3-201ENST00000263066 PKN1Q16512 942 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 MEA1Q16626 185 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 MYLK3Q32MK0 819 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 EDRF1Q3B7T1 1238 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 MEI1Q5TIA1 1274 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 CCDC137Q6PK04 289 aaKnown RBP8.69□□□□□ -1.02
LDB3-201ENST00000263066 LVRNQ6Q4G3 990 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 XKR5Q6UX68 686 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 RAPH1Q70E73 1250 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 USP50Q70EL3 339 aaPredicted RBP8.69□□□□□ -1.02
LDB3-201ENST00000263066 MCF2L2Q86YR7 1114 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 KBTBD2Q8IY47 623 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 ZFP28Q8NHY6 868 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 PPP4R1Q8TF05 950 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 TSNARE1Q96NA8 513 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 ACAP3Q96P50 834 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 KLF6Q99612 283 aaPredicted RBP8.69□□□□□ -1.02
LDB3-201ENST00000263066 FBXO6Q9NRD1 293 aaPredicted RBP8.69□□□□□ -1.02
LDB3-201ENST00000263066 EPS15L1Q9UBC2 864 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 HSFX1Q9UBD0 423 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 DIS3Q9Y2L1 958 aaKnown RBP8.69□□□□□ -1.02
LDB3-201ENST00000263066 MROH7Q68CQ1 1323 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 LOC100653049A0A140TA62 436 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 FZD9O00144 591 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 PODXLO00592 558 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 KRT34O76011 436 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 OR52Z1P0C646 297 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 PABPC1P11940 636 aaKnown RBP8.69□□□□□ -1.02
LDB3-201ENST00000263066 PSMC3P17980 439 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 CCNE1P24864 410 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 HOXD13P35453 343 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 MAN2A1Q16706 1144 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 NEK5Q6P3R8 708 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 DHDDSQ86SQ9 333 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 CDR2LQ86X02 465 aaPredicted RBP8.69□□□□□ -1.02
LDB3-201ENST00000263066 GRAMD2AQ8IUY3 354 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 DEPDC4Q8N2C3 294 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 EME1Q96AY2 570 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 KCNMB3Q9NPA1 279 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 TEKT2Q9UIF3 430 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 ZNF831Q5JPB2 1677 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 PDS5AQ29RF7 1337 aaKnown RBP8.69□□□□□ -1.02
LDB3-201ENST00000263066 A0A087X0T9 212 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 MEI4A8MW99 385 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 RIPK2O43353 540 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 ASNA1O43681 348 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 IDH3BO43837 385 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 FKBP6O75344 327 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 GCNT3O95395 438 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 FAM228BP0C875 321 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 VDRP11473 427 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 RAG1P15918 1043 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 PEX2P28328 305 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 MTMR1Q13613 665 aa8.69□□□□□ -1.02
LDB3-201ENST00000263066 GIT2Q14161 759 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms