RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 PLCB4Q15147 1175 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 MEA1Q16626 185 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 COBLL1Q53SF7 1204 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 MDH1BQ5I0G3 518 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 MEI1Q5TIA1 1274 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 TAPT1Q6NXT6 567 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 IRF2BP1Q8IU81 584 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 SLAIN1Q8ND83 568 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 AGR3Q8TD06 166 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 DHX38Q92620 1227 aaKnown RBP9.97□□□□□ -0.81
SIM1-201ENST00000262901 RUBCNQ92622 972 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 MTG1Q9BT17 334 aaPredicted RBP9.97□□□□□ -0.81
SIM1-201ENST00000262901 BCAS3Q9H6U6 928 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 KIAA1586Q9HCI6 787 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 SLC40A1Q9NP59 571 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 MARCOQ9UEW3 520 aaPredicted RBP9.97□□□□□ -0.81
SIM1-201ENST00000262901 EFR3BQ9Y2G0 817 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 M0QYV0 167 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 MAP3K6O95382 1288 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 CALB1P05937 261 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 MMP3P08254 477 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 RALAP11233 206 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 NFKBIAP25963 317 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 RAD23BP54727 409 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 DNAJC3Q13217 504 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 MMEL1Q495T6 779 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 ARSHQ5FYA8 562 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 B3GNT9Q6UX72 402 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 TRPM8Q7Z2W7 1104 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 ARRDC4Q8NCT1 418 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 ZNF507Q8TCN5 953 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 DTX3LQ8TDB6 740 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.97□□□□□ -0.81
SIM1-201ENST00000262901 ERP27Q96DN0 273 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 GLT1D1Q96MS3 346 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 MCEEQ96PE7 176 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 ARHGAP39Q9C0H5 1083 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 HSD3B7Q9H2F3 369 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 SEMA4AQ9H3S1 761 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 LRRC4Q9HBW1 653 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 KCND1Q9NSA2 647 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 USP20Q9Y2K6 914 aa9.97□□□□□ -0.81
SIM1-201ENST00000262901 USP15Q9Y4E8 981 aaPredicted RBP9.97□□□□□ -0.81
SIM1-201ENST00000262901 MYH7BA7E2Y1 1941 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.96□□□□□ -0.81
SIM1-201ENST00000262901 SEPT4O43236 478 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 CYP2C9P11712 490 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 NAMPTP43490 491 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 NPTX2P47972 431 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 PSEN2P49810 448 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 ARFIP2P53365 341 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 CAV1Q03135 178 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 MFSD10Q14728 455 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 GRAMD1BQ3KR37 738 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 PABPC1LQ4VXU2 614 aaKnown RBP9.96□□□□□ -0.81
SIM1-201ENST00000262901 KDM7AQ6ZMT4 941 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 ZNF720Q7Z2F6 126 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 SLC13A5Q86YT5 568 aaPredicted RBP9.96□□□□□ -0.81
SIM1-201ENST00000262901 CCDC124Q96CT7 223 aaKnown RBP9.96□□□□□ -0.81
SIM1-201ENST00000262901 ATXN7L3BQ96GX2 97 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 C2orf49Q9BVC5 232 aaPredicted RBP9.96□□□□□ -0.81
SIM1-201ENST00000262901 TARS2Q9BW92 718 aaKnown RBP9.96□□□□□ -0.81
SIM1-201ENST00000262901 VPS11Q9H270 941 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 PABPC3Q9H361 631 aaKnown RBP9.96□□□□□ -0.81
SIM1-201ENST00000262901 CYP4F11Q9HBI6 524 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 NPHS2Q9NP85 383 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 UVRAGQ9P2Y5 699 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 GABRQQ9UN88 632 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 ASTN1O14525 1302 aa9.96□□□□□ -0.81
SIM1-201ENST00000262901 GMNNO75496 209 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 ATG7O95352 703 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 HLA-DRAP01903 254 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 SLC4A1P02730 911 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 WEE2P0C1S8 567 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 SKIP12755 728 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 GRK4P32298 578 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 BEX3Q00994 111 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 GRIK4Q16099 956 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 HIF1AQ16665 826 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 AGBL2Q5U5Z8 902 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 RBBP8NLQ8NC74 664 aaPredicted RBP9.96□□□□□ -0.82
SIM1-201ENST00000262901 PPWD1Q96BP3 646 aaKnown RBP9.96□□□□□ -0.82
SIM1-201ENST00000262901 FAM161BQ96MY7 647 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 NUDCD1Q96RS6 583 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 SNX25Q9H3E2 840 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 TOPORSQ9NS56 1045 aaPredicted RBP9.96□□□□□ -0.82
SIM1-201ENST00000262901 WRAP73Q9P2S5 460 aaPredicted RBP9.96□□□□□ -0.82
SIM1-201ENST00000262901 ZMAT5Q9UDW3 170 aaKnown RBP9.96□□□□□ -0.82
SIM1-201ENST00000262901 NEU2Q9Y3R4 380 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 C17orf102A2RUQ5 167 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 LPXNO60711 386 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 COILP38432 576 aaPredicted RBP9.96□□□□□ -0.82
SIM1-201ENST00000262901 GARSP41250 739 aaKnown RBP9.96□□□□□ -0.82
SIM1-201ENST00000262901 SOX10P56693 466 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 BCAR1P56945 870 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 CDR2Q01850 454 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 SPOPLQ6IQ16 392 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 AFAP1L2Q8N4X5 818 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 PRPF31Q8WWY3 499 aaKnown RBP9.96□□□□□ -0.82
SIM1-201ENST00000262901 MKNK1Q9BUB5 465 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms