RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 WNT8AQ9H1J5 351 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 PTPRHQ9HD43 1115 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 SLC27A5Q9Y2P5 690 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 SPATA31E1Q6ZUB1 1445 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 VWA5AO00534 786 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 HALP42357 657 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 PRIM2P49643 509 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 CNTN1Q12860 1018 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 PARP9Q8IXQ6 854 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 ST13P4Q8IZP2 240 aaPredicted RBP16.42■□□□□ 0.22
SHANK3-201ENST00000262795 ATP8B1O43520 1251 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 MRPS15P82914 257 aaKnown RBP16.42■□□□□ 0.22
SHANK3-201ENST00000262795 CNTN2Q02246 1040 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 RUVBL2Q9Y230 463 aaKnown RBP16.42■□□□□ 0.22
SHANK3-201ENST00000262795 POLR1DQ9Y2S0 133 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 GYG2O15488 501 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.42■□□□□ 0.22
SHANK3-201ENST00000262795 MTFMTQ96DP5 389 aaKnown RBP16.42■□□□□ 0.22
SHANK3-201ENST00000262795 DDX47Q9H0S4 455 aaKnown RBP16.42■□□□□ 0.22
SHANK3-201ENST00000262795 ERCC6L2Q5T890 1561 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 GSTM1P09488 218 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 ACRP10323 421 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 MLH1P40692 756 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 CLK2P49760 499 aaKnown RBP16.42■□□□□ 0.22
SHANK3-201ENST00000262795 TRIM60Q495X7 471 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 GOLPH3LQ9H4A5 285 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 ACTR5Q9H9F9 607 aaPredicted RBP16.42■□□□□ 0.22
SHANK3-201ENST00000262795 TBX20Q9UMR3 447 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 SLC2A3P11169 496 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 VAC14Q08AM6 782 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 FAM71DQ8N9W8 422 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 CHMP2BQ9UQN3 213 aa16.42■□□□□ 0.22
SHANK3-201ENST00000262795 PYGBP11216 843 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 OR1E1P30953 314 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 UBXN6Q9BZV1 441 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 ASAH2Q9NR71 780 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 IL1RAPL1Q9NZN1 696 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 ZFP69BQ9UJL9 534 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 CEP152O94986 1710 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 SCAMP1O15126 338 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 SRGNP10124 158 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 MPZL3Q6UWV2 235 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 TRPV2Q9Y5S1 764 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 TRAV19A0A0A6YYK7 116 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 PDK1Q15118 436 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 SLC30A10Q6XR72 485 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 TRAPPC5Q8IUR0 188 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 CCDC60Q8IWA6 550 aaPredicted RBP16.41■□□□□ 0.22
SHANK3-201ENST00000262795 COLGALT2Q8IYK4 626 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 INPP5DQ92835 1189 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 OSBPL1AQ9BXW6 950 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 PRRG4Q9BZD6 226 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 APEX2Q9UBZ4 518 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 ESYT3A0FGR9 886 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 SKIV2L2P42285 1042 aaKnown RBP16.41■□□□□ 0.22
SHANK3-201ENST00000262795 TKTL1P51854 596 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 NEK2P51955 445 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 MB21D2Q8IYB1 491 aaPredicted RBP16.41■□□□□ 0.22
SHANK3-201ENST00000262795 HIPK3Q9H422 1215 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 LCMT1Q9UIC8 334 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 STRNO43815 780 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 GAS2O43903 313 aaKnown RBP16.41■□□□□ 0.22
SHANK3-201ENST00000262795 MYL2P10916 166 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 BDNFP23560 247 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 PMS2P54278 862 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 MED21Q13503 144 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 CCDC142Q17RM4 750 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 SERPINA13PQ6UXR4 307 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 CHPFQ8IZ52 775 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 EXD1Q8NHP7 514 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 TIPINQ9BVW5 301 aa16.41■□□□□ 0.22
SHANK3-201ENST00000262795 VPS26AO75436 327 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 GSNP06396 782 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 ADCY2Q08462 1091 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 MTFR1Q15390 333 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 CEP41Q9BYV8 373 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 RSAD1Q9HA92 442 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 LRRC14BA6NHZ5 514 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 TTLL9Q3SXZ7 439 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 ATG9AQ7Z3C6 839 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 RCOR2Q8IZ40 523 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 COPS5Q92905 334 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 CLPBQ9H078 707 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 NOP53Q9NZM5 478 aaKnown RBP16.4■□□□□ 0.22
SHANK3-201ENST00000262795 GRIN1Q05586 938 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 NECTIN1Q15223 517 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 GSTA3Q16772 222 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 UGT3A1Q6NUS8 523 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 SLC35G2Q8TBE7 412 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 ZC3H7BQ9UGR2 993 aaKnown RBP16.4■□□□□ 0.22
SHANK3-201ENST00000262795 ING5Q8WYH8 240 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 COL26A1Q96A83 441 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 GPRASP2Q96D09 838 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 MS4A14Q96JA4 679 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 OXCT2Q9BYC2 517 aaPredicted RBP16.4■□□□□ 0.22
SHANK3-201ENST00000262795 ABHD10Q9NUJ1 306 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 CDY2AQ9Y6F7 541 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 ABCC3O15438 1527 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 LRRIQ3A6PVS8 624 aaPredicted RBP16.4■□□□□ 0.22
SHANK3-201ENST00000262795 KCNT1Q5JUK3 1230 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms