RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ZNF507Q8TCN5 953 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 BRD8Q9H0E9 1235 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 RANBP17Q9H2T7 1088 aaKnown RBP14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 TASP1Q9H6P5 420 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 TBC1D12O60347 775 aa14.08□□□□□ -0.15
PDGFRB-201ENST00000261799 PMPCBO75439 489 aa14.08□□□□□ -0.15
PDGFRB-201ENST00000261799 MYL2P10916 166 aa14.08□□□□□ -0.15
PDGFRB-201ENST00000261799 SYCP2LQ5T4T6 812 aa14.08□□□□□ -0.15
PDGFRB-201ENST00000261799 TRIM68Q6AZZ1 485 aa14.08□□□□□ -0.15
PDGFRB-201ENST00000261799 ADGRA2Q96PE1 1338 aa14.08□□□□□ -0.15
PDGFRB-201ENST00000261799 OSBPL9Q96SU4 736 aa14.08□□□□□ -0.15
PDGFRB-201ENST00000261799 FRMD8P1Q9BZ68 369 aaPredicted RBP14.08□□□□□ -0.15
PDGFRB-201ENST00000261799 ZNF518BQ9C0D4 1074 aa14.08□□□□□ -0.15
PDGFRB-201ENST00000261799 RASSF4Q9H2L5 321 aa14.08□□□□□ -0.15
PDGFRB-201ENST00000261799 SPASTQ9UBP0 616 aa14.08□□□□□ -0.15
PDGFRB-201ENST00000261799 CXCL14O95715 111 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 HPGDP15428 266 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 HDAC4P56524 1084 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 POU4F1Q01851 419 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 CNTN2Q02246 1040 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 SYTL2Q9HCH5 934 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 SMPD4Q9NXE4 827 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 KANSL1LA0AUZ9 987 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 C1QTNF3-AMACRE9PGA6 284 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 NCK2O43639 380 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 PRMT3O60678 531 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 MED24O75448 989 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 NCAPHQ15003 741 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 RBM23Q86U06 439 aaKnown RBP14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 CPA6Q8N4T0 437 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 C10orf53Q8N6V4 93 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 TMC2Q8TDI7 906 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 CYTH2Q99418 400 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 CAPN7Q9Y6W3 813 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 MAPTP10636 758 aaKnown RBP14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 SKP1P63208 163 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 TMA16Q96EY4 203 aaKnown RBP14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 TEX33O43247 280 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 C16orf72Q14CZ0 275 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 PLPP4Q5VZY2 271 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 WDR41Q9HAD4 459 aa14.08□□□□□ -0.16
PDGFRB-201ENST00000261799 PHF2O75151 1096 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 PSMA3P25788 255 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 SMTNL2Q2TAL5 461 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 HSP90AA5PQ58FG0 334 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 ACAD10Q6JQN1 1059 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 AASDHPPTQ9NRN7 309 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 CACNA2D2Q9NY47 1150 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 ADA2Q9NZK5 511 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 PDZK1P1A8MUH7 402 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 GLUD1P00367 558 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 CYP24A1Q07973 514 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 HLA-DQA1Q5Y7H0 255 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 CELF4Q9BZC1 486 aaKnown RBP14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 TBC1D13Q9NVG8 400 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 KIAA1210Q9ULL0 1709 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 HELQQ8TDG4 1101 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 RIPOR3Q96MK2 946 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 TTC26A0AVF1 554 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 SPAG6O75602 509 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 BYSLQ13895 437 aaKnown RBP14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 FBXL19Q6PCT2 694 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 SARM1Q6SZW1 724 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 PRR23CQ6ZRP0 262 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 LGI2Q8N0V4 545 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 ASB7Q9H672 318 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 ATP13A1Q9HD20 1204 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 A1CFQ9NQ94 594 aaKnown RBP14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 TMEM161AQ9NX61 479 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 VPS51Q9UID3 782 aa14.07□□□□□ -0.16
PDGFRB-201ENST00000261799 BMP10O95393 424 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 ELNP15502 786 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 SP100P23497 879 aaPredicted RBP14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 MAPK1P28482 360 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 POLR2LP62875 67 aaKnown RBP14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 OXCT2Q9BYC2 517 aaPredicted RBP14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 SELPP16109 830 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 FAM110CQ1W6H9 321 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 TRMT11Q7Z4G4 463 aaKnown RBP14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 USP38Q8NB14 1042 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 PYCARDQ9ULZ3 195 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 BARX2Q9UMQ3 279 aaPredicted RBP14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 FOXN1O15353 648 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 FGFR1P11362 822 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 NR1D1P20393 614 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 STAT4Q14765 748 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 SLC18A3Q16572 532 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 SGO1Q5FBB7 561 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 WDR18Q9BV38 432 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 SEZ6LQ9BYH1 1024 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 MRPS17Q9Y2R5 130 aaKnown RBP14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 KIF20BQ96Q89 1820 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 ATP8B1O43520 1251 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 GALCP54803 685 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 C15orf52Q6ZUT6 534 aaKnown RBP14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 FAM47EQ6ZV65 393 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 ZDHHC17Q8IUH5 632 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 FAM172AQ8WUF8 416 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 MCCC1Q96RQ3 725 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms