RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 R3HDM2Q9Y2K5 976 aaKnown RBP16.83■□□□□ 0.28
SREBF1-201ENST00000261646 POLRMTO00411 1230 aaKnown RBP16.82■□□□□ 0.28
SREBF1-201ENST00000261646 BST1Q10588 318 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 PDK3Q15120 406 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 MAPRE2Q15555 327 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 VSTM1Q6UX27 236 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 MAML3Q96JK9 1138 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 SUN2Q9UH99 717 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 RTN3O95197 1032 aaPredicted RBP16.82■□□□□ 0.28
SREBF1-201ENST00000261646 TNFAIP8O95379 198 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 PTGIRP43119 386 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 NPTX2P47972 431 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 ADRM1Q16186 407 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 CIAPIN1Q6FI81 312 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 FAM43BQ6ZT52 329 aaPredicted RBP16.82■□□□□ 0.28
SREBF1-201ENST00000261646 NCAPG2Q86XI2 1143 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 KCNK4Q9NYG8 393 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 SLC17A7Q9P2U7 560 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 FEM1BQ9UK73 627 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 GLRA3O75311 464 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 RALBP11234 206 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 VAV1P15498 845 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 SNRPFP62306 86 aaKnown RBP16.82■□□□□ 0.28
SREBF1-201ENST00000261646 FMO1Q01740 532 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 LIN52Q52LA3 116 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 FAXDC2Q96IV6 333 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 CLPTM1LQ96KA5 538 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 NMUR2Q9GZQ4 415 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 ILKAPQ9H0C8 392 aaPredicted RBP16.82■□□□□ 0.28
SREBF1-201ENST00000261646 ATXN10Q9UBB4 475 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 FMN2Q9NZ56 1722 aa16.82■□□□□ 0.28
SREBF1-201ENST00000261646 MYH8P13535 1937 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 PEX1O43933 1283 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 SPRP35270 261 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-201ENST00000261646 CHN2P52757 468 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 SLC5A9Q2M3M2 681 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 PRAMEF18Q5VWM3 479 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 MTHFD1LQ6UB35 978 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 KIAA2013Q8IYS2 634 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 ULK2Q8IYT8 1036 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 ABRAQ8N0Z2 381 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 IL1RL2Q9HB29 575 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 ADGRA3Q8IWK6 1321 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 PEX11AO75192 247 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 ABHD2P08910 425 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 FGRP09769 529 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 ADRA2BP18089 450 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 TFE3P19532 575 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-201ENST00000261646 SHMT1P34896 483 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 ITGA9Q13797 1035 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 USP10Q14694 798 aaKnown RBP16.81■□□□□ 0.28
SREBF1-201ENST00000261646 TRIM16LQ309B1 348 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 RFWD3Q6PCD5 774 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 DENND5BQ6ZUT9 1274 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 NET1Q7Z628 596 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-201ENST00000261646 FNDC3AQ9Y2H6 1198 aaKnown RBP16.81■□□□□ 0.28
SREBF1-201ENST00000261646 ZMYM2Q9UBW7 1377 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 F8VP50 259 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 MRPS22P82650 360 aaKnown RBP16.81■□□□□ 0.28
SREBF1-201ENST00000261646 ACVR2BQ13705 512 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 DHDDSQ86SQ9 333 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 SETD3Q86TU7 594 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-201ENST00000261646 GSTCDQ8NEC7 633 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 PRMT6Q96LA8 375 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-201ENST00000261646 PCDHB18PQ96TA0 734 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 FRMD8Q9BZ67 464 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-201ENST00000261646 TMEM39BQ9GZU3 492 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 ZNF408Q9H9D4 720 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 EFCAB1Q9HAE3 211 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 KCNMB3Q9NPA1 279 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 AVENQ9NQS1 362 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-201ENST00000261646 RNF146Q9NTX7 359 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 THAP1Q9NVV9 213 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 IPO11Q9UI26 975 aaKnown RBP16.81■□□□□ 0.28
SREBF1-201ENST00000261646 TMEM150BA6NC51 233 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 EXTL3O43909 919 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 CYP1A2P05177 515 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 LLGL2Q6P1M3 1020 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 C1orf186Q6ZWK4 172 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 OTOP1Q7RTM1 612 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 SGF29Q96ES7 293 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 CRAMP1Q96RY5 1269 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 CADM1Q9BY67 442 aaKnown RBP16.81■□□□□ 0.28
SREBF1-201ENST00000261646 LRRC4CQ9HCJ2 640 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 CDYLQ9Y232 598 aa16.81■□□□□ 0.28
SREBF1-201ENST00000261646 SMIM31A0A1B0GVY4 71 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 NCKAP1LP55160 1127 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 RHBDL3P58872 404 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 ACAP1Q15027 740 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 SGSM1Q2NKQ1 1148 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 RBM44Q6ZP01 1051 aaKnown RBP16.8■□□□□ 0.28
SREBF1-201ENST00000261646 NUP93Q8N1F7 819 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 LZICQ8WZA0 190 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 ZNF669Q96BR6 464 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-201ENST00000261646 CNDP1Q96KN2 507 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 MRPL4Q9BYD3 311 aaKnown RBP16.8■□□□□ 0.28
SREBF1-201ENST00000261646 GID8Q9NWU2 228 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 ZMYND8Q9ULU4 1186 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-201ENST00000261646 WASF2Q9Y6W5 498 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 ZMPSTE24O75844 475 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms