RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 SLC35B2Q8TB61 432 aa18.55■□□□□ 0.56
SSB-201ENST00000260956 DDX23Q9BUQ8 820 aaKnown RBP18.55■□□□□ 0.56
SSB-201ENST00000260956 TRAIPQ9BWF2 469 aa18.55■□□□□ 0.56
SSB-201ENST00000260956 EIF2AQ9BY44 585 aaKnown RBP18.55■□□□□ 0.56
SSB-201ENST00000260956 UBE2OQ9C0C9 1292 aaKnown RBP18.55■□□□□ 0.56
SSB-201ENST00000260956 DNPEPQ9ULA0 475 aa18.55■□□□□ 0.56
SSB-201ENST00000260956 GOLGA8SH3BPF8 625 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 NPTXRO95502 500 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 KRT3P12035 628 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 P4HA1P13674 534 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 DARSP14868 501 aaKnown RBP18.54■□□□□ 0.56
SSB-201ENST00000260956 BMP8BP34820 402 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 MAGOHP61326 146 aaKnown RBP18.54■□□□□ 0.56
SSB-201ENST00000260956 BYSLQ13895 437 aaKnown RBP18.54■□□□□ 0.56
SSB-201ENST00000260956 TRIP13Q15645 432 aaPredicted RBP18.54■□□□□ 0.56
SSB-201ENST00000260956 TTC39CQ8N584 583 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 ALLCQ8N6M5 410 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 ACSF2Q96CM8 615 aaPredicted RBP18.54■□□□□ 0.56
SSB-201ENST00000260956 ADPGKQ9BRR6 497 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 METTL5Q9NRN9 209 aaKnown RBP18.54■□□□□ 0.56
SSB-201ENST00000260956 CNTN3Q9P232 1028 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 PSMA2P25787 234 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 HPDP32754 393 aaPredicted RBP18.54■□□□□ 0.56
SSB-201ENST00000260956 VCPP55072 806 aaKnown RBP18.54■□□□□ 0.56
SSB-201ENST00000260956 PCBP1Q15365 356 aaKnown RBP eCLIP18.54■□□□□ 0.56
SSB-201ENST00000260956 TFDP3Q5H9I0 405 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 FAM26DQ5JW98 314 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 TMEM240Q5SV17 173 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 SLC27A1Q6PCB7 646 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 ZNF365Q70YC5 407 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 KIF12Q96FN5 646 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 EPN3Q9H201 632 aa18.54■□□□□ 0.56
SSB-201ENST00000260956 CWC15Q9P013 229 aaKnown RBP18.54■□□□□ 0.56
SSB-201ENST00000260956 DRG1Q9Y295 367 aaKnown RBP18.54■□□□□ 0.56
SSB-201ENST00000260956 M0QYV0 167 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 TJP3O95049 919 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 IFFO1Q0D2I5 559 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 AUHQ13825 339 aaKnown RBP18.53■□□□□ 0.56
SSB-201ENST00000260956 XKR4Q5GH76 650 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 BBS12Q6ZW61 710 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 LIMS2Q7Z4I7 341 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 PRUNE1Q86TP1 453 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 EMC1Q8N766 993 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 CCDC89Q8N998 374 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 EPS8L3Q8TE67 593 aaKnown RBP18.53■□□□□ 0.56
SSB-201ENST00000260956 TMEM40Q8WWA1 233 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 CCDC114Q96M63 670 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 GCOM2Q9BZD3 368 aaPredicted RBP18.53■□□□□ 0.56
SSB-201ENST00000260956 IL23AQ9NPF7 189 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 SNTG2Q9NY99 539 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 CXXC1Q9P0U4 656 aaPredicted RBP18.53■□□□□ 0.56
SSB-201ENST00000260956 TUBGCP4Q9UGJ1 667 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 KIAA1257Q9ULG3 409 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 CDY2AQ9Y6F7 541 aa18.53■□□□□ 0.56
SSB-201ENST00000260956 TCEA3O75764 348 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 GABBR2O75899 941 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 ENDOD1O94919 500 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 CXCL10P02778 98 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 SSR1P43307 286 aaKnown RBP18.52■□□□□ 0.56
SSB-201ENST00000260956 MMP13P45452 471 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 CDC42EP1Q00587 391 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 UBXN11Q5T124 520 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 CROCCP2Q86T23 111 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 LRRC52Q8N7C0 313 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 CMASQ8NFW8 434 aaPredicted RBP18.52■□□□□ 0.56
SSB-201ENST00000260956 BCAS4Q8TDM0 211 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 PIWIL1Q96J94 861 aaKnown RBP18.52■□□□□ 0.56
SSB-201ENST00000260956 SCLT1Q96NL6 688 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 PEBP4Q96S96 227 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 MRPL45Q9BRJ2 306 aaKnown RBP18.52■□□□□ 0.56
SSB-201ENST00000260956 CENPHQ9H3R5 247 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 NINJ2Q9NZG7 142 aa18.52■□□□□ 0.56
SSB-201ENST00000260956 LRRD1A4D1F6 860 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 TTC4O95801 387 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 AGTP01019 485 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 ITGAVP06756 1048 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 ARSEP51690 589 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 MRPS6P82932 125 aaKnown RBP18.52■□□□□ 0.55
SSB-201ENST00000260956 PPIGQ13427 754 aaKnown RBP eCLIP18.52■□□□□ 0.552e-8■□□□□ 9.4
SSB-201ENST00000260956 ACAP1Q15027 740 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 IZUMO3Q5VZ72 239 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 OTOP2Q7RTS6 562 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 BBOF1Q8ND07 529 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 PWWP2AQ96N64 755 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 OSMRQ99650 979 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 NT5C1AQ9BXI3 368 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 FOXP3Q9BZS1 431 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 TSPYL1Q9H0U9 437 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 AGO3Q9H9G7 860 aaKnown RBP18.52■□□□□ 0.55
SSB-201ENST00000260956 EURLQ9NYK6 297 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 ANAPC5Q9UJX4 755 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 TSPAN16Q9UKR8 245 aa18.52■□□□□ 0.55
SSB-201ENST00000260956 TANC1Q9C0D5 1861 aa18.51■□□□□ 0.55
SSB-201ENST00000260956 C2CD4BA6NLJ0 364 aa18.51■□□□□ 0.55
SSB-201ENST00000260956 DNALI1O14645 258 aaPredicted RBP18.51■□□□□ 0.55
SSB-201ENST00000260956 KRT7P08729 469 aa18.51■□□□□ 0.55
SSB-201ENST00000260956 GHRP10912 638 aa18.51■□□□□ 0.55
SSB-201ENST00000260956 ATF7P17544 494 aaPredicted RBP18.51■□□□□ 0.55
SSB-201ENST00000260956 KDELR1P24390 212 aa18.51■□□□□ 0.55
SSB-201ENST00000260956 PCK1P35558 622 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms