RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 SSR1P43307 286 aaKnown RBP17.58■□□□□ 0.41
HLA-F-216ENST00000259951 ZNF143P52747 638 aaPredicted RBP17.58■□□□□ 0.41
HLA-F-216ENST00000259951 RNASE9P60153 205 aaKnown RBP17.58■□□□□ 0.41
HLA-F-216ENST00000259951 ADIGQ0VDE8 80 aa17.58■□□□□ 0.41
HLA-F-216ENST00000259951 SLC39A12Q504Y0 691 aa17.58■□□□□ 0.41
HLA-F-216ENST00000259951 SEL1L2Q5TEA6 688 aa17.58■□□□□ 0.41
HLA-F-216ENST00000259951 LRRC38Q5VT99 294 aa17.58■□□□□ 0.41
HLA-F-216ENST00000259951 CC2D1AQ6P1N0 951 aaPredicted RBP17.58■□□□□ 0.41
HLA-F-216ENST00000259951 RASGEF1CQ8N431 466 aa17.58■□□□□ 0.41
HLA-F-216ENST00000259951 TMEM169Q96HH4 297 aa17.58■□□□□ 0.41
HLA-F-216ENST00000259951 MTIF3Q9H2K0 278 aaKnown RBP17.58■□□□□ 0.41
HLA-F-216ENST00000259951 CNGB3Q9NQW8 809 aa17.58■□□□□ 0.41
HLA-F-216ENST00000259951 TMLHEQ9NVH6 421 aa17.58■□□□□ 0.41
HLA-F-216ENST00000259951 STK39Q9UEW8 545 aa17.58■□□□□ 0.41
HLA-F-216ENST00000259951 TTC7AQ9ULT0 858 aaPredicted RBP17.58■□□□□ 0.41
HLA-F-216ENST00000259951 C2CD4BA6NLJ0 364 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 DPYSL4O14531 572 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 GLI1P08151 1106 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 PDGFRAP16234 1089 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 PPM1AP35813 382 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 TKTL1P51854 596 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 OGDHQ02218 1023 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 ZNF252P-AS1Q0IIN9 211 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 HADHQ16836 314 aaKnown RBP17.58■□□□□ 0.4
HLA-F-216ENST00000259951 VSTM1Q6UX27 236 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 TMEM173Q86WV6 379 aaPredicted RBP17.58■□□□□ 0.4
HLA-F-216ENST00000259951 EMC1Q8N766 993 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 UBXN4Q92575 508 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 ALG3Q92685 438 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 KRT35Q92764 455 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.58■□□□□ 0.4
HLA-F-216ENST00000259951 SPG21Q9NZD8 308 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 PCDHB5Q9Y5E4 795 aa17.58■□□□□ 0.4
HLA-F-216ENST00000259951 F8VP50 259 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 HSF2BPO75031 334 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 GJB5O95377 273 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 EFEMP2O95967 443 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 SDC4P31431 198 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 MRPS5P82675 430 aaKnown RBP17.57■□□□□ 0.4
HLA-F-216ENST00000259951 RAB41Q5JT25 222 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 TMEM240Q5SV17 173 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 KIAA1841Q6NSI8 718 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 SLC39A11Q8N1S5 342 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 COLGALT1Q8NBJ5 622 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 ZMIZ2Q8NF64 920 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 C2orf15Q8WU43 125 aaKnown RBP17.57■□□□□ 0.4
HLA-F-216ENST00000259951 BCL7CQ8WUZ0 217 aaPredicted RBP17.57■□□□□ 0.4
HLA-F-216ENST00000259951 RXFP2Q8WXD0 754 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 RNPC3Q96LT9 517 aaKnown RBP17.57■□□□□ 0.4
HLA-F-216ENST00000259951 KCNK16Q96T55 309 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 SLC9A7Q96T83 725 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 LBHD1Q9BQE6 289 aaPredicted RBP17.57■□□□□ 0.4
HLA-F-216ENST00000259951 ZBED2Q9BTP6 218 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 INSL6Q9Y581 213 aa17.57■□□□□ 0.4
HLA-F-216ENST00000259951 MRPL42Q9Y6G3 142 aaKnown RBP17.57■□□□□ 0.4
HLA-F-216ENST00000259951 KIAA1671Q9BY89 1806 aa17.56■□□□□ 0.4
HLA-F-216ENST00000259951 PDE2AO00408 941 aaPredicted RBP17.56■□□□□ 0.4
HLA-F-216ENST00000259951 CETN2P41208 172 aa17.56■□□□□ 0.4
HLA-F-216ENST00000259951 MAGEA11P43364 429 aa17.56■□□□□ 0.4
HLA-F-216ENST00000259951 HTRA4P83105 476 aaPredicted RBP17.56■□□□□ 0.4
HLA-F-216ENST00000259951 RTP2Q5QGT7 225 aa17.56■□□□□ 0.4
HLA-F-216ENST00000259951 POLNQ7Z5Q5 900 aa17.56■□□□□ 0.4
HLA-F-216ENST00000259951 TMCO2Q7Z6W1 182 aaPredicted RBP17.56■□□□□ 0.4
HLA-F-216ENST00000259951 CPNE8Q86YQ8 564 aa17.56■□□□□ 0.4
HLA-F-216ENST00000259951 KATNAL2Q8IYT4 538 aa17.56■□□□□ 0.4
HLA-F-216ENST00000259951 RNF168Q8IYW5 571 aaPredicted RBP17.56■□□□□ 0.4
HLA-F-216ENST00000259951 SCML4Q8N228 414 aa17.56■□□□□ 0.4
HLA-F-216ENST00000259951 PHOSPHO2Q8TCD6 241 aa17.56■□□□□ 0.4
HLA-F-216ENST00000259951 HERVK_113Q902F9 699 aa17.56■□□□□ 0.4
HLA-F-216ENST00000259951 MS4A14Q96JA4 679 aa17.56■□□□□ 0.4
HLA-F-216ENST00000259951 DDX56Q9NY93 547 aaKnown RBP17.56■□□□□ 0.4
HLA-F-216ENST00000259951 ABI2Q9NYB9 513 aaPredicted RBP17.56■□□□□ 0.4
HLA-F-216ENST00000259951 PCDHB12Q9Y5F1 795 aa17.56■□□□□ 0.4
HLA-F-216ENST00000259951 BACE2Q9Y5Z0 518 aa17.56■□□□□ 0.4
HLA-F-216ENST00000259951 HHLA1C9JL84 531 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 TRIM66O15016 1216 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 TBC1D4O60343 1298 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 GRAP2O75791 330 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 SOD2P04179 222 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 KRT7P08729 469 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 OR4Q2P0C623 313 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 CPB1P15086 417 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 PCK1P35558 622 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 FLT3P36888 993 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 GRIK1P39086 918 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 PTPN9P43378 593 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 MARCKSL1P49006 195 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 GPR17Q13304 367 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 ODF2Q5BJF6 829 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 DCAF12L1Q5VU92 463 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 FIBCD1Q8N539 461 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 SPATA4Q8NEY3 305 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 SPPL2BQ8TCT7 592 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 PIK3R5Q8WYR1 880 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 IRGQQ8WZA9 623 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 KHSRPQ92945 711 aaKnown RBP eCLIP17.55■□□□□ 0.4
HLA-F-216ENST00000259951 PIWIL1Q96J94 861 aaKnown RBP17.55■□□□□ 0.4
HLA-F-216ENST00000259951 B3GALT6Q96L58 329 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 TRIM62Q9BVG3 475 aa17.55■□□□□ 0.4
HLA-F-216ENST00000259951 CHST7Q9NS84 486 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms