RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 RFC4P35249 363 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 CASP5P51878 434 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 PRKCQQ04759 706 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 SSRP1Q08945 709 aaKnown RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 RESTQ13127 1097 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 ATP1A4Q13733 1029 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 CYP27C1Q4G0S4 372 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 ANKRD20A4Q4UJ75 823 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 DCLRE1AQ6PJP8 1040 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 FAM196AQ6ZSG2 479 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 TAB3Q8N5C8 712 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 UTP4Q969X6 686 aaKnown RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 PBKQ96KB5 322 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 PRICKLE1Q96MT3 831 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 C17orf62Q9BQA9 187 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 MCMBPQ9BTE3 642 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 TRIM62Q9BVG3 475 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 BCL2L14Q9BZR8 327 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 MKRN2Q9H000 416 aaKnown RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 SLC6A17Q9H1V8 727 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 LHX5Q9H2C1 402 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 GINS2Q9Y248 185 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 CAMSAP1Q5T5Y3 1602 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 FAM135BQ49AJ0 1406 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 AGLP35573 1532 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 FAM172BPA6NC97 362 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 SGK1O00141 431 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 PLA2G6O60733 806 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 NDUFS2O75306 463 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 EDN3P14138 238 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 SLC5A2P31639 672 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 TRHRP34981 398 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 OR1G1P47890 313 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 NPEPPSP55786 919 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 GPX6P59796 221 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 ATP6V0D1P61421 351 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 ECT2LQ008S8 904 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 OCA2Q04671 838 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 VAC14Q08AM6 782 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 MINDY4Q4G0A6 757 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 C1orf146Q5VVC0 180 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 TRAF7Q6Q0C0 670 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 MACC1Q6ZN28 852 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 TMTC3Q6ZXV5 915 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 FBXO33Q7Z6M2 555 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 CDR2LQ86X02 465 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 ADGRG2Q8IZP9 1017 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 TBC1D19Q8N5T2 526 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 INPP5DQ92835 1189 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 COL26A1Q96A83 441 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 TRIM43Q96BQ3 446 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 ZNF486Q96H40 463 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 NTMT1Q9BV86 223 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 ERVMER34-1Q9H9K5 563 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 MCCC2Q9HCC0 563 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 SNTG2Q9NY99 539 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 CYTH4Q9UIA0 394 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 DERAQ9Y315 318 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 PCDHGB7Q9Y5F8 929 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 PIK3C2BO00750 1634 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 AKAP12Q02952 1782 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 FAM221BA6H8Z2 402 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 SYNCRIPO60506 623 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 ESRRBO95718 433 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 SNAP29O95721 258 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 ASS1P00966 412 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 NR3C2P08235 984 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 SLC5A1P13866 664 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 GAP43P17677 238 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 AIF1P55008 147 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 RNF4P78317 190 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 TRIM14Q14142 442 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 CERKLQ49MI3 558 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 EFHC1Q5JVL4 640 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 GLYCTKQ8IVS8 523 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 ZNF527Q8NB42 609 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 SLC4A11Q8NBS3 891 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 FAM13CQ8NE31 585 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 OR7D4Q8NG98 312 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 SSH3Q8TE77 659 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 NRG4Q8WWG1 115 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 BORCS5Q969J3 196 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 RAB7BQ96AH8 199 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 TRMT2BQ96GJ1 504 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 AK8Q96MA6 479 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 CCDC43Q96MW1 224 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 NLRC4Q9NPP4 1024 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 TXLNGQ9NUQ3 528 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 RRN3Q9NYV6 651 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 ADD3Q9UEY8 706 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 TSR3Q9UJK0 312 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 ANGPTL2Q9UKU9 493 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 NFU1Q9UMS0 254 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 MTMR6Q9Y217 621 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 ERGIC3Q9Y282 383 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 DAGLAQ9Y4D2 1042 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 KDM6AO15550 1401 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 AKAP10O43572 662 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms