RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 ADAM17P78536 824 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 KCNT1Q5JUK3 1230 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 CYB5D1Q6P9G0 228 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 UNC45BQ8IWX7 931 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 GPC2Q8N158 579 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 SHKBP1Q8TBC3 707 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 DCPSQ96C86 337 aaKnown RBP9.62□□□□□ -0.87
RPA1-201ENST00000254719 ZNF419Q96HQ0 510 aaPredicted RBP9.62□□□□□ -0.87
RPA1-201ENST00000254719 RABGEF1Q9UJ41 708 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 NR2E3Q9Y5X4 410 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 MGRN1O60291 552 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 SNAI1O95863 264 aaPredicted RBP9.61□□□□□ -0.87
RPA1-201ENST00000254719 INHBAP08476 426 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 KRT7P08729 469 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 CXCL8P10145 99 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 ITIH2P19823 946 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 SCTRP47872 440 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 MMRN1Q13201 1228 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 ZPBP2Q6X784 338 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 ERICH1Q86X53 443 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 IFNLR1Q8IU57 520 aaPredicted RBP9.61□□□□□ -0.87
RPA1-201ENST00000254719 PDIK1LQ8N165 341 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 RNF169Q8NCN4 708 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 FBXO41Q8TF61 875 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 PGLYRP2Q96PD5 576 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 PTPN18Q99952 460 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 TMEM121Q9BTD3 319 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 MFHAS1Q9Y4C4 1052 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 VWA8A3KMH1 1905 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 LUC7L3O95232 432 aaKnown RBP9.61□□□□□ -0.87
RPA1-201ENST00000254719 ACSL3O95573 720 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 ALADP13716 330 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 RPL34P49207 117 aaKnown RBP9.61□□□□□ -0.87
RPA1-201ENST00000254719 VPS41P49754 854 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 SLC1A5Q15758 541 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 MAPK6Q16659 721 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 ZNF394Q53GI3 561 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 ZNF618Q5T7W0 954 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 METTL7BQ6UX53 244 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 NCAPG2Q86XI2 1143 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 FUKQ8N0W3 1084 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 PQLC3Q8N755 202 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 EMC1Q8N766 993 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 C12orf29Q8N999 325 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 CMASQ8NFW8 434 aaPredicted RBP9.61□□□□□ -0.87
RPA1-201ENST00000254719 EXD1Q8NHP7 514 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 TMEM40Q8WWA1 233 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 OSBPL8Q9BZF1 889 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 VRTNQ9H8Y1 702 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 CNTN3Q9P232 1028 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 PLXNA4Q9HCM2 1894 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 MYO18AQ92614 2054 aaKnown RBP9.61□□□□□ -0.87
RPA1-201ENST00000254719 SGK1O00141 431 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 TLR3O15455 904 aaKnown RBP9.61□□□□□ -0.87
RPA1-201ENST00000254719 SH3BGRP55822 239 aaPredicted RBP9.61□□□□□ -0.87
RPA1-201ENST00000254719 NFX1Q12986 1120 aaKnown RBP9.61□□□□□ -0.87
RPA1-201ENST00000254719 STAT4Q14765 748 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 ZNF792Q3KQV3 632 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 CDHR3Q6ZTQ4 885 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 WDR49Q8IV35 697 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 ATL2Q8NHH9 583 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 FEZF2Q8TBJ5 459 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 NSMCE1Q8WV22 266 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 NKD2Q969F2 451 aaPredicted RBP9.61□□□□□ -0.87
RPA1-201ENST00000254719 MCRS1Q96EZ8 462 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 SNF8Q96H20 258 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 MCEEQ96PE7 176 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 ARHGEF4Q9NR80 690 aa9.61□□□□□ -0.87
RPA1-201ENST00000254719 EXOC1LA0A1B0GW35 172 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 RBM47A0AV96 593 aaKnown RBP9.6□□□□□ -0.87
RPA1-201ENST00000254719 CFAP73A6NFT4 308 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 CHUKO15111 745 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 MAGEB2O15479 319 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 PSTPIP1O43586 416 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 ARRB2P32121 409 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 GARSP41250 739 aaKnown RBP9.6□□□□□ -0.87
RPA1-201ENST00000254719 ETV4P43268 484 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 MAGEA3P43357 314 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 ATXN1P54253 815 aaKnown RBP9.6□□□□□ -0.87
RPA1-201ENST00000254719 MTM1Q13496 603 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 CA9Q16790 459 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 KIAA0319Q5VV43 1072 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 ZCCHC9Q8N567 271 aaKnown RBP9.6□□□□□ -0.87
RPA1-201ENST00000254719 ZSCAN18Q8TBC5 510 aaPredicted RBP9.6□□□□□ -0.87
RPA1-201ENST00000254719 C9orf72Q96LT7 481 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 NFKBIZQ9BYH8 718 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 RPF1Q9H9Y2 349 aaKnown RBP9.6□□□□□ -0.87
RPA1-201ENST00000254719 E5RJQ4 531 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 M0QZ92 97 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 CILPO75339 1184 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 TOM1L1O75674 476 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 MARK3P27448 753 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 MSH2P43246 934 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 CLCN3P51790 818 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 ARL4CP56559 192 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 HP1BP3Q5SSJ5 553 aaPredicted RBP9.6□□□□□ -0.87
RPA1-201ENST00000254719 NPNTQ6UXI9 565 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 ECHDC2Q86YB7 292 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 PPP4R1Q8TF05 950 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 CHMP6Q96FZ7 201 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms