RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 KRT84Q9NSB2 600 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 WDR35Q9P2L0 1181 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 H7C0S8 307 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 PSMD3O43242 534 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 ATP6V1B2P21281 511 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 ME2P23368 584 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 CDK17Q00537 523 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 SLC9A5Q14940 896 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 TIMM50Q3ZCQ8 353 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 MTERF2Q49AM1 385 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 SLC45A4Q5BKX6 768 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 SYDE2Q5VT97 1194 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 AHI1Q8N157 1196 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 SHCBP1Q8NEM2 672 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 DLG3Q92796 817 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 ROGDIQ9GZN7 287 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 LY9Q9HBG7 655 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 CD163L1Q9NR16 1453 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 ARHGEF38Q9NXL2 777 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 CCDC59Q9P031 241 aaKnown RBP13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 PIM2Q9P1W9 311 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 TFR2Q9UP52 801 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 CEP170BQ9Y4F5 1589 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 OSTNP61366 133 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 EXOC3L1Q86VI1 746 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 FUCA2Q9BTY2 467 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 NUAK2Q9H093 628 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 JMJD4Q9H9V9 463 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 ZBTB24O43167 697 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 ECE2O60344 883 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 TLR2O60603 784 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 EN1Q05925 392 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 EDRF1Q3B7T1 1238 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 ZNF57Q68EA5 555 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 PDPK2PQ6A1A2 396 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 RBM43Q6ZSC3 357 aaKnown RBP13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 SGMS1Q86VZ5 419 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 APPL2Q8NEU8 664 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 OR7A2PQ8NGA2 310 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 HES6Q96HZ4 224 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 INTS13Q9NVM9 706 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 USP17L5A8MUK1 530 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 M0QYV0 167 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 GALK1P51570 392 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 PKN2Q16513 984 aaKnown RBP13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 MZT2BQ6NZ67 158 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 PADI6Q6TGC4 694 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 APBB2Q92870 758 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 OXNAD1Q96HP4 312 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 GOLPH3Q9H4A6 298 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 MROH7-TTC4A0A0A0MT08 1334 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 LDLRP01130 860 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 PSMA3P25788 255 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 SUPT20HL1Q3ZLR7 823 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 FIGNQ5HY92 759 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 TMED8Q6PL24 325 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 AKAP14Q86UN6 197 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 C1orf131Q8NDD1 294 aaKnown RBP13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 VPS33AQ96AX1 596 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 KLHL32Q96NJ5 620 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 C7orf25Q9BPX7 421 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 FAM213AQ9BRX8 229 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 LACRTQ9GZZ8 138 aa13.61□□□□□ -0.23
PCDHGA3-201ENST00000253812 SEC24AO95486 1093 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 S100A6P06703 90 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 ABATP80404 500 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 RIPK1Q13546 671 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 NKX1-1Q15270 411 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 THOC7Q6I9Y2 204 aaKnown RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 DENND1BQ6P3S1 775 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 FAM193BQ96PV7 902 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 ZSWIM1Q9BR11 485 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 KLHL11Q9NVR0 708 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 DMTF1Q9Y222 760 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 POLR1AO95602 1720 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 ATXN2Q99700 1313 aaKnown RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 BTN3A3O00478 584 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 RTN3O95197 1032 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 CCDC166P0CW27 439 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 TUBA1BP68363 451 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 RC3H1Q5TC82 1133 aaKnown RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 PRR5LQ6MZQ0 368 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 RNF19BQ6ZMZ0 732 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 TMEM179Q6ZVK1 233 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 TUBA1AQ71U36 451 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 EIF1ADQ8N9N8 165 aaKnown RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 LRRN4CLQ8ND94 238 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 ASAP3Q8TDY4 903 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 UBE2OQ9C0C9 1292 aaKnown RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 SEMA4AQ9H3S1 761 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 MRPL39Q9NYK5 338 aaKnown RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 NAGPAQ9UK23 515 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 NAALADL1Q9UQQ1 740 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 TELO2Q9Y4R8 837 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 SPATA31A5Q5VU36 1347 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 SPATA31A7Q8IWB4 1347 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 USP42Q9H9J4 1324 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms