RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 NSUN2Q08J23 767 aaKnown RBP eCLIP15.59■□□□□ 0.09
UBE4B-201ENST00000253251 KCNA1Q09470 495 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 KYNUQ16719 465 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 SH3D19Q5HYK7 790 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 LRRC52Q8N7C0 313 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 EPS8L1Q8TE68 723 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 APBB2Q92870 758 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 HSFY1Q96LI6 401 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 YME1L1Q96TA2 773 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 GPR20Q99678 358 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 PCDH9Q9HC56 1237 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 ARFGEF2Q9Y6D5 1785 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 F5H423 210 aaPredicted RBP15.59■□□□□ 0.09
UBE4B-201ENST00000253251 NDUFS3O75489 264 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 RPL9P32969 192 aaKnown RBP15.59■□□□□ 0.09
UBE4B-201ENST00000253251 MAP3K7CLP57077 242 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 ARSHQ5FYA8 562 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 LRRC38Q5VT99 294 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 NOP9Q86U38 636 aaKnown RBP15.59■□□□□ 0.09
UBE4B-201ENST00000253251 USP33Q8TEY7 942 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 GIPC2Q8TF65 315 aa15.59■□□□□ 0.09
UBE4B-201ENST00000253251 CSDE1O75534 798 aaKnown RBP15.58■□□□□ 0.09
UBE4B-201ENST00000253251 ADRB2P07550 413 aa15.58■□□□□ 0.09
UBE4B-201ENST00000253251 NR2C2P49116 596 aa15.58■□□□□ 0.09
UBE4B-201ENST00000253251 GEMIN4P57678 1058 aaKnown RBP15.58■□□□□ 0.09
UBE4B-201ENST00000253251 SLC6A3Q01959 620 aa15.58■□□□□ 0.09
UBE4B-201ENST00000253251 PTK7Q13308 1070 aa15.58■□□□□ 0.09
UBE4B-201ENST00000253251 ORC1Q13415 861 aa15.58■□□□□ 0.09
UBE4B-201ENST00000253251 ERMARDQ5T6L9 678 aa15.58■□□□□ 0.09
UBE4B-201ENST00000253251 SPRYD7Q5W111 196 aa15.58■□□□□ 0.09
UBE4B-201ENST00000253251 CLEC4DQ8WXI8 215 aa15.58■□□□□ 0.09
UBE4B-201ENST00000253251 BTBD6Q96KE9 485 aa15.58■□□□□ 0.09
UBE4B-201ENST00000253251 ZNF212Q9UDV6 495 aa15.58■□□□□ 0.09
UBE4B-201ENST00000253251 CASTOR2A6NHX0 329 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 CFAP99D6REC4 459 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 NVLO15381 856 aaKnown RBP15.58■□□□□ 0.08
UBE4B-201ENST00000253251 AMHP03971 560 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 APOA4P06727 396 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 KCNA2P16389 499 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 RAB42Q8N4Z0 105 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 EIF1ADQ8N9N8 165 aaKnown RBP15.58■□□□□ 0.08
UBE4B-201ENST00000253251 NLGN2Q8NFZ4 835 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 CHORDC1Q9UHD1 332 aaPredicted RBP15.58■□□□□ 0.08
UBE4B-201ENST00000253251 TRIM17Q9Y577 477 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 IGLV3-22A0A075B6J6 115 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 ZNF197O14709 1029 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 AKAP5P24588 427 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 CCR1P32246 355 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 HDAC4P56524 1084 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 MOB2Q70IA6 237 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 CASKIN2Q8WXE0 1202 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 CINPQ9BW66 212 aaPredicted RBP15.58■□□□□ 0.08
UBE4B-201ENST00000253251 NDFIP2Q9NV92 336 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 GRID1Q9ULK0 1009 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 BTBD19C9JJ37 291 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 TGFB1I1O43294 461 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 FKTNO75072 461 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 TRPA1O75762 1119 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 TBCCQ15814 346 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 KIF19Q2TAC6 998 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 HERC6Q8IVU3 1022 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.08
UBE4B-201ENST00000253251 SERPINB11Q96P15 392 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 EGFL8Q99944 293 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 SLC45A1Q9Y2W3 748 aa15.58■□□□□ 0.08
UBE4B-201ENST00000253251 ZNF263O14978 683 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 GSTA4O15217 222 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 CYP2C18P33260 490 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 TUFMP49411 452 aaKnown RBP15.57■□□□□ 0.08
UBE4B-201ENST00000253251 CLNS1AP54105 237 aaKnown RBP15.57■□□□□ 0.08
UBE4B-201ENST00000253251 VCPP55072 806 aaKnown RBP15.57■□□□□ 0.08
UBE4B-201ENST00000253251 BEX3Q00994 111 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 ZIM3Q96PE6 472 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 C20orf96Q9NUD7 363 aaPredicted RBP15.57■□□□□ 0.08
UBE4B-201ENST00000253251 SHOC2Q9UQ13 582 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 CDY2AQ9Y6F7 541 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 ERBB2P04626 1255 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 RALBP11234 206 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 USP10Q14694 798 aaKnown RBP15.57■□□□□ 0.08
UBE4B-201ENST00000253251 NT5DC3Q86UY8 548 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 SNCAIPQ9Y6H5 919 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 OXCT1P55809 520 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 GTF2H3Q13889 308 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 ARHGEF7Q14155 803 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 IPMKQ8NFU5 416 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 C18orf25Q96B23 403 aaPredicted RBP15.57■□□□□ 0.08
UBE4B-201ENST00000253251 MTBPQ96DY7 904 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 EPN3Q9H201 632 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 SARS2Q9NP81 518 aaKnown RBP15.57■□□□□ 0.08
UBE4B-201ENST00000253251 ATP11BQ9Y2G3 1177 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 GIT1Q9Y2X7 761 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 ARL2BPQ9Y2Y0 163 aa15.57■□□□□ 0.08
UBE4B-201ENST00000253251 TMEM88BA6NKF7 163 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 WNT7AO00755 349 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 CDH18Q13634 790 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 UGCGQ16739 394 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 ADAM2Q99965 735 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 DRG1Q9Y295 367 aaKnown RBP15.56■□□□□ 0.08
UBE4B-201ENST00000253251 CFAP73A6NFT4 308 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 SDR42E2A6NKP2 422 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms