RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 LRRD1A4D1F6 860 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 C2orf71A6NGG8 1288 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 CALB1P05937 261 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 BRD2P25440 801 aaKnown RBP12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 ABCD1P33897 745 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 IRX1P78414 480 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 UCMAQ8WVF2 138 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 NIFKQ9BYG3 293 aaKnown RBP12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 FRMD8P1Q9BZ68 369 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 C20orf27Q9GZN8 174 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 COX16Q9P0S2 106 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 HEY2Q9UBP5 337 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 TCRBV9S1A1TA0A576 114 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 K7ERI5 159 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 MSCO60682 206 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 SERPINB3P29508 390 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 TAF5Q15542 800 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 BSPRYQ5W0U4 402 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 TRNP1Q6NT89 227 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 PRPF39Q86UA1 669 aaKnown RBP12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 ATP6V0A1Q93050 837 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 MSTO1Q9BUK6 570 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 TMEM134Q9H6X4 195 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 JPH1Q9HDC5 661 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 AGTPBP1Q9UPW5 1226 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 RAP1GAPP47736 663 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 MOB2Q70IA6 237 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 ATP11CQ8NB49 1132 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 ALKBH8Q96BT7 664 aaKnown RBP12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 TTLL3Q9Y4R7 772 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 PLXNA1Q9UIW2 1896 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 CCDC22O60826 627 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 PSAPP07602 524 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 ALDH3A1P30838 453 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 RASSF2P50749 326 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 TAP1Q03518 808 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 KPNB1Q14974 876 aaKnown RBP12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 ATG14Q6ZNE5 492 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 TREML1Q86YW5 311 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 RHPN2Q8IUC4 686 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 SULF1Q8IWU6 871 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 EMC1Q8N766 993 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 APOPT1Q96IL0 206 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 PEBP4Q96S96 227 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 TMEM120AQ9BXJ8 343 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 USP29Q9HBJ7 922 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 CISHQ9NSE2 258 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 HACL1Q9UJ83 578 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 SGK1O00141 431 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 KRT36O76013 467 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 CCNFP41002 786 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 MAGEA3P43357 314 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 GABRB2P47870 512 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 GMPSP49915 693 aaPredicted RBP12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 DPYSL3Q14195 570 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 SCYL2Q6P3W7 929 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 BRSK2Q8IWQ3 736 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 CEP120Q8N960 986 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 DNAJC9Q8WXX5 260 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 RTP4Q96DX8 246 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 LHX5Q9H2C1 402 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 STX18Q9P2W9 335 aaKnown RBP12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 SLC9A2Q9UBY0 812 aa12.49□□□□□ -0.41
SEC61A1-201ENST00000243253 SMAPO00193 183 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 HOXC6P09630 235 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 SUPT20HL2P0C7V6 817 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 PROZP22891 400 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 SP100P23497 879 aaPredicted RBP12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 CCND2P30279 289 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 GCLCP48506 637 aaPredicted RBP12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 TMEM62Q0P6H9 643 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 SEPT7Q16181 437 aaKnown RBP12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 KLHL38Q2WGJ6 581 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 SUPT20HL1Q3ZLR7 823 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 GPAT2Q6NUI2 795 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 DENND1BQ6P3S1 775 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 WDR49Q8IV35 697 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 ARMC2Q8NEN0 867 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 APOL6Q9BWW8 343 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 SMYD2Q9NRG4 433 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 MKS1Q9NXB0 559 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 DCTN4Q9UJW0 460 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 ANKRD33BA6NCL7 494 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 H0YCG3 227 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 SNNO75324 88 aaPredicted RBP12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 RFPL1O75677 317 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 LMNAP02545 664 aaKnown RBP12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 IL4RP24394 825 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 MAGEA6P43360 314 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 MYL6P60660 151 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 TUBB3Q13509 450 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 CAPSQ13938 189 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 RAB6CQ53S08 254 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 XKR3Q5GH77 459 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 HHATQ5VTY9 493 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 XYLT1Q86Y38 959 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 PYROXD1Q8WU10 500 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 NSL1Q96IY1 281 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 RAB6CQ9H0N0 254 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 PIDD1Q9HB75 910 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms