RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 SFR1Q86XK3 245 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 NACC1Q96RE7 527 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 ARHGEF4Q9NR80 690 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 TUBA8Q9NY65 449 aaPredicted RBP20.74■□□□□ 0.91
HOXC13-201ENST00000243056 EURLQ9NYK6 297 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 HEY2Q9UBP5 337 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 SPO11Q9Y5K1 396 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 FADS3Q9Y5Q0 445 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 HEMK1Q9Y5R4 338 aaPredicted RBP20.74■□□□□ 0.91
HOXC13-201ENST00000243056 ZMYM2Q9UBW7 1377 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 ADGRA2Q96PE1 1338 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 C15orf38-AP3S2A0A0A6YYH1 394 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.74■□□□□ 0.91
HOXC13-201ENST00000243056 FARP2O94887 1054 aaPredicted RBP20.74■□□□□ 0.91
HOXC13-201ENST00000243056 RARBP10826 455 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 VCLP18206 1134 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 HOXD11P31277 338 aaPredicted RBP20.74■□□□□ 0.91
HOXC13-201ENST00000243056 KCNJ1P48048 391 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 AP2B1P63010 937 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 PPIDQ08752 370 aaKnown RBP20.74■□□□□ 0.91
HOXC13-201ENST00000243056 C1orf186Q6ZWK4 172 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 ARPINQ7Z6K5 226 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 TSG101Q99816 390 aa20.74■□□□□ 0.91
HOXC13-201ENST00000243056 FBXO6Q9NRD1 293 aaPredicted RBP20.74■□□□□ 0.91
HOXC13-201ENST00000243056 KRT38O76015 456 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 C17orf99Q6UX52 265 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 ABHD15Q6UXT9 468 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 TRIM59Q8IWR1 403 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 FBXO27Q8NI29 283 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 CLPTM1LQ96KA5 538 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 GRIP2Q9C0E4 1043 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 NINJ2Q9NZG7 142 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 FLRT1Q9NZU1 646 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 AJAP1Q9UKB5 411 aaPredicted RBP20.73■□□□□ 0.91
HOXC13-201ENST00000243056 DOLKQ9UPQ8 538 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.73■□□□□ 0.91
HOXC13-201ENST00000243056 MKI67P46013 3256 aaKnown RBP20.73■□□□□ 0.91
HOXC13-201ENST00000243056 TCRBV7S2A1N4TA0A589 114 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 SH3PXD2BA1X283 911 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 AP1G1O43747 822 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 CDH16O75309 829 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 SNAI1O95863 264 aaPredicted RBP20.73■□□□□ 0.91
HOXC13-201ENST00000243056 SLC9A1P19634 815 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 ADCYAP1R1P41586 468 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 CPA2P48052 419 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 MARCKSL1P49006 195 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 OVGP1Q12889 678 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 KCTD21Q4G0X4 260 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 LPCAT4Q643R3 524 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 PPP1R13LQ8WUF5 828 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 GFM2Q969S9 779 aaKnown RBP20.73■□□□□ 0.91
HOXC13-201ENST00000243056 PWWP2AQ96N64 755 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 TRAIPQ9BWF2 469 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 DMTF1Q9Y222 760 aa20.73■□□□□ 0.91
HOXC13-201ENST00000243056 ATP8B3O60423 1300 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 SYNGAP1Q96PV0 1343 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 DKC1O60832 514 aaKnown RBP eCLIP20.72■□□□□ 0.91
HOXC13-201ENST00000243056 TXNP10599 105 aaKnown RBP20.72■□□□□ 0.91
HOXC13-201ENST00000243056 CYP2B6P20813 491 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 ICAM3P32942 547 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 RARRES1P49788 294 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 GRB14Q14449 540 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 SLC1A5Q15758 541 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 ZNF746Q6NUN9 644 aaPredicted RBP20.72■□□□□ 0.91
HOXC13-201ENST00000243056 PADI6Q6TGC4 694 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 CCDC105Q8IYK2 499 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 GTF3C2Q8WUA4 911 aaPredicted RBP20.72■□□□□ 0.91
HOXC13-201ENST00000243056 SENP6Q9GZR1 1112 aaPredicted RBP20.72■□□□□ 0.91
HOXC13-201ENST00000243056 HBS1LQ9Y450 684 aaKnown RBP20.72■□□□□ 0.91
HOXC13-201ENST00000243056 PCDHA2Q9Y5H9 948 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 NCANO14594 1321 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 GSTTP1A0A1W2PQM5 241 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 ARHGEF35A5YM69 484 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 THAP12O43422 761 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 STAM2O75886 525 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 ESRRAP11474 423 aaPredicted RBP20.72■□□□□ 0.91
HOXC13-201ENST00000243056 PRKCIP41743 596 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 CALCOCO2Q13137 446 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 XKR9Q5GH70 373 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 FAM26FQ5R3K3 315 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 RHBDF2Q6PJF5 856 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 NET1Q7Z628 596 aaPredicted RBP20.72■□□□□ 0.91
HOXC13-201ENST00000243056 SLC25A41Q8N5S1 370 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 MAML1Q92585 1016 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 CDHR1Q96JP9 859 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 PCYT2Q99447 389 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 DNAJB4Q9UDY4 337 aa20.72■□□□□ 0.91
HOXC13-201ENST00000243056 FAF1Q9UNN5 650 aaPredicted RBP20.72■□□□□ 0.91
HOXC13-201ENST00000243056 PVALEFA0A1B0GWK0 134 aa20.71■□□□□ 0.91
HOXC13-201ENST00000243056 ADCY6O43306 1168 aa20.71■□□□□ 0.91
HOXC13-201ENST00000243056 TRMUO75648 421 aaKnown RBP20.71■□□□□ 0.91
HOXC13-201ENST00000243056 OXSR1O95747 527 aaPredicted RBP20.71■□□□□ 0.91
HOXC13-201ENST00000243056 CLPTM1O96005 669 aa20.71■□□□□ 0.91
HOXC13-201ENST00000243056 NMT1P30419 496 aaKnown RBP20.71■□□□□ 0.91
HOXC13-201ENST00000243056 COILP38432 576 aaPredicted RBP20.71■□□□□ 0.91
HOXC13-201ENST00000243056 ACTR3P61158 418 aa20.71■□□□□ 0.91
HOXC13-201ENST00000243056 PSMC5P62195 406 aa20.71■□□□□ 0.91
HOXC13-201ENST00000243056 RNF111Q6ZNA4 994 aa20.71■□□□□ 0.91
HOXC13-201ENST00000243056 DAW1Q8N136 415 aa20.71■□□□□ 0.91
HOXC13-201ENST00000243056 OLIG1Q8TAK6 271 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms