RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 RDM1Q8NG50 284 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 SHKBP1Q8TBC3 707 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 MCUR1Q96AQ8 359 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 CLPTM1LQ96KA5 538 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 TLE6Q9H808 572 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 DCLRE1BQ9H816 532 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 UGT1A7Q9HAW7 530 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 UGT1A10Q9HAW8 530 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 UGT1A8Q9HAW9 530 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 DLGAP2Q9P1A6 1054 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 CXorf49A8MYA2 514 aaPredicted RBP16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 CCDC22O60826 627 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 SRGAP2CP0DJJ0 459 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 ETV4P43268 484 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 BMPR2Q13873 1038 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 KLHL38Q2WGJ6 581 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 XRRA1Q6P2D8 792 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 THNSL1Q8IYQ7 743 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 CCDC33Q8N5R6 958 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 KCTD6Q8NC69 237 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 SPATA18Q8TC71 538 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 NSUN6Q8TEA1 469 aaKnown RBP16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 SKA1Q96BD8 255 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 NSL1Q96IY1 281 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 ZNF333Q96JL9 665 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 ASCC2Q9H1I8 757 aaPredicted RBP16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 ZNF302Q9NR11 478 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 DDX56Q9NY93 547 aaKnown RBP16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 HMGXB4Q9UGU5 601 aa16.06■□□□□ 0.16
PCDHB8-201ENST00000239444 SMAD1Q15797 465 aaKnown RBP16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 RNF220Q5VTB9 566 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 PPM1NQ8N819 430 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 SCG3Q8WXD2 468 aaKnown RBP16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 SLC7A3Q8WY07 619 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 SLC13A1Q9BZW2 595 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 DHX33Q9H6R0 707 aaKnown RBP16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 MGAMO43451 1857 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 FCHO1O14526 889 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 OATP04181 439 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 ERBB2P04626 1255 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 GJB1P08034 283 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 KRT19P08727 400 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 ESRRAP11474 423 aaPredicted RBP16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 NAMPTP43490 491 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 HMGCS2P54868 508 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 CDK16Q00536 496 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 DPYSL3Q14195 570 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 RCN2Q14257 317 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 PRKD1Q15139 912 aaPredicted RBP16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 C1orf228Q6PIY5 440 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 BBS12Q6ZW61 710 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 LMNTD2Q8IXW0 634 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 NIF3L1Q9GZT8 377 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 VPS11Q9H270 941 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 SAR1AQ9NR31 198 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 ARHGEF4Q9NR80 690 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 ZNF112Q9UJU3 913 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 PHIPQ8WWQ0 1821 aa16.05■□□□□ 0.16
PCDHB8-201ENST00000239444 TM9SF1O15321 606 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 GRAP2O75791 330 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 ENO1P06733 434 aaKnown RBP16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 INHBAP08476 426 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 PTPRAP18433 802 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 MIPP30301 263 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 ARL2P36404 184 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 MXRA7P84157 204 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 CNTN2Q02246 1040 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 THOC5Q13769 683 aaKnown RBP16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 TMEM132BQ14DG7 1078 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 CDO1Q16878 200 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 HSF5Q4G112 596 aaPredicted RBP16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 SLFN12LQ6IEE8 588 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 TREML1Q86YW5 311 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 KBTBD2Q8IY47 623 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 ZNF280CQ8ND82 737 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 PEBP4Q96S96 227 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 SYNCQ9H7C4 482 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 IKBKGQ9Y6K9 419 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 TRIM49D1C9J1S8 452 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 E7ESA3 106 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 H3BRJ5 948 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 NEK3P51956 506 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 IRX4P78413 519 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 TRPC3Q13507 836 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 TSNAXIP1Q2TAA8 658 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 ZNF699Q32M78 642 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 DCAF15Q66K64 600 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 EEPD1Q7L9B9 569 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 PCGF5Q86SE9 256 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 LRRC71Q8N4P6 559 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 PIWIL1Q96J94 861 aaKnown RBP16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 ACAP3Q96P50 834 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 TWNKQ96RR1 684 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 CYTH2Q99418 400 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 PPP1R12CQ9BZL4 782 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 ZNF214Q9UL59 606 aaPredicted RBP16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 ADAMTS5Q9UNA0 930 aa16.04■□□□□ 0.16
PCDHB8-201ENST00000239444 SIGLEC16A6NMB1 481 aa16.03■□□□□ 0.16
PCDHB8-201ENST00000239444 LIN7AO14910 233 aaPredicted RBP16.03■□□□□ 0.16
PCDHB8-201ENST00000239444 MAFGO15525 162 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms