RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TYSND1Q2T9J0 566 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 CCDC81Q6ZN84 652 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 CAMK1DQ8IU85 385 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 OR7A2PQ8NGA2 310 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 C9orf16Q9BUW7 83 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 AASDHPPTQ9NRN7 309 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 ZC3H7BQ9UGR2 993 aaKnown RBP13.34□□□□□ -0.27
VAMP4-201ENST00000236192 MKL2Q9ULH7 1088 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 BTBD3Q9Y2F9 522 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 STXBP5LQ9Y2K9 1186 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 TPPPO94811 219 aa13.33□□□□□ -0.27
VAMP4-201ENST00000236192 SEC24AO95486 1093 aa13.33□□□□□ -0.27
VAMP4-201ENST00000236192 PHKA1P46020 1223 aa13.33□□□□□ -0.27
VAMP4-201ENST00000236192 CCT3P49368 545 aaKnown RBP13.33□□□□□ -0.27
VAMP4-201ENST00000236192 GNG2P59768 71 aa13.33□□□□□ -0.27
VAMP4-201ENST00000236192 YWHAEP62258 255 aaKnown RBP13.33□□□□□ -0.27
VAMP4-201ENST00000236192 MOGQ16653 247 aa13.33□□□□□ -0.27
VAMP4-201ENST00000236192 AASDHQ4L235 1098 aaPredicted RBP13.33□□□□□ -0.27
VAMP4-201ENST00000236192 KLHL12Q53G59 568 aa13.33□□□□□ -0.27
VAMP4-201ENST00000236192 PPM1LQ5SGD2 360 aa13.33□□□□□ -0.27
VAMP4-201ENST00000236192 PRR23CQ6ZRP0 262 aa13.33□□□□□ -0.27
VAMP4-201ENST00000236192 DHRSXQ8N5I4 330 aa13.33□□□□□ -0.27
VAMP4-201ENST00000236192 ACCSQ96QU6 501 aa13.33□□□□□ -0.27
VAMP4-201ENST00000236192 TAS2R1Q9NYW7 299 aa13.33□□□□□ -0.27
VAMP4-201ENST00000236192 ILVBLA1L0T0 632 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 TMEM191CA6NGB0 347 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 RALAP11233 206 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 GRK2P25098 689 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 SERPINH1P50454 418 aaKnown RBP13.33□□□□□ -0.28
VAMP4-201ENST00000236192 RUNX1T1Q06455 604 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 ARHGEF6Q15052 776 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 SCYL2Q6P3W7 929 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 ZBTB46Q86UZ6 589 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 FBXO36Q8NEA4 188 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 FAM118BQ9BPY3 351 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 CXorf21Q9HAI6 301 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 FAM32AQ9Y421 112 aaKnown RBP13.33□□□□□ -0.28
VAMP4-201ENST00000236192 KIF1BO60333 1816 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 BICRAQ9NZM4 1560 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 STIP1P31948 543 aaKnown RBP13.33□□□□□ -0.28
VAMP4-201ENST00000236192 VAC14Q08AM6 782 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 PPP4R4Q6NUP7 873 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 TTC7BQ86TV6 843 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 ZCCHC9Q8N567 271 aaKnown RBP13.33□□□□□ -0.28
VAMP4-201ENST00000236192 LRRC20Q8TCA0 184 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 EMC3Q9P0I2 261 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 PRR23AA6NEV1 266 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 CYP27B1O15528 508 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 NADKO95544 446 aaPredicted RBP13.33□□□□□ -0.28
VAMP4-201ENST00000236192 FASP25445 335 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 OLR1P78380 273 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 SCRN3Q0VDG4 424 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 BAP1Q92560 729 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 KLHL32Q96NJ5 620 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 UNKQ9C0B0 810 aaKnown RBP13.33□□□□□ -0.28
VAMP4-201ENST00000236192 C6orf62Q9GZU0 229 aaPredicted RBP13.33□□□□□ -0.28
VAMP4-201ENST00000236192 PCIF1Q9H4Z3 704 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 IGSF9Q9P2J2 1179 aa13.33□□□□□ -0.28
VAMP4-201ENST00000236192 NTRK3Q16288 839 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 CCNG2Q16589 344 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 TWF2Q6IBS0 349 aaKnown RBP13.32□□□□□ -0.28
VAMP4-201ENST00000236192 LRRC49Q8IUZ0 686 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 SLC52A2Q9HAB3 445 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 LGALS13Q9UHV8 139 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 CENPBD1B2RD01 187 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 ANGPT2O15123 496 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 TLR3O15455 904 aaKnown RBP13.32□□□□□ -0.28
VAMP4-201ENST00000236192 CCND2P30279 289 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 TRAF3Q13114 568 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 NME3Q13232 169 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 MAPRE1Q15691 268 aaKnown RBP13.32□□□□□ -0.28
VAMP4-201ENST00000236192 OR9Q1Q8NGQ5 310 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 EPN2O95208 641 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 MYCLP1P12525 358 aaPredicted RBP13.32□□□□□ -0.28
VAMP4-201ENST00000236192 ROR1Q01973 937 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 DLG1Q12959 904 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 APTXQ7Z2E3 356 aaKnown RBP13.32□□□□□ -0.28
VAMP4-201ENST00000236192 PBRM1Q86U86 1689 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 TREML1Q86YW5 311 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 SYTL1Q8IYJ3 562 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 CCNYL1Q8N7R7 359 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 TDRD5Q8NAT2 981 aaKnown RBP13.32□□□□□ -0.28
VAMP4-201ENST00000236192 SEPT8Q92599 483 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 HEATR9A2RTY3 570 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 ZSCAN5BA6NJL1 495 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 ZBTB39O15060 712 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 PDE8AO60658 829 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 RNASEH1O60930 286 aaKnown RBP13.32□□□□□ -0.28
VAMP4-201ENST00000236192 CRTAMO95727 393 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 ZNF23P17027 643 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 ITIH1P19827 911 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 C4BPBP20851 252 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 CYP4A11Q02928 519 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 TBCELQ5QJ74 424 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 VSTM1Q6UX27 236 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 HTRA1Q92743 480 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 DDX17Q92841 729 aaKnown RBP13.32□□□□□ -0.28
VAMP4-201ENST00000236192 HAPLN3Q96S86 360 aa13.32□□□□□ -0.28
VAMP4-201ENST00000236192 SMARCAD1Q9H4L7 1026 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms