RNA–Protein interactions for RNA: ENST00000233025.11

SPCS1-201, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 1,082 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-201ENST00000233025 ZPBP2Q6X784 338 aa17.66■□□□□ 0.42
SPCS1-201ENST00000233025 DCP1BQ8IZD4 617 aaKnown RBP17.66■□□□□ 0.42
SPCS1-201ENST00000233025 THEM5Q8N1Q8 247 aa17.66■□□□□ 0.42
SPCS1-201ENST00000233025 ZNF513Q8N8E2 541 aaPredicted RBP17.66■□□□□ 0.42
SPCS1-201ENST00000233025 KIAA1958Q8N8K9 716 aa17.66■□□□□ 0.42
SPCS1-201ENST00000233025 ERMNQ8TAM6 284 aa17.66■□□□□ 0.42
SPCS1-201ENST00000233025 FOXJ1Q92949 421 aa17.66■□□□□ 0.42
SPCS1-201ENST00000233025 HCN2Q9UL51 889 aa17.66■□□□□ 0.42
SPCS1-201ENST00000233025 BTBD3Q9Y2F9 522 aa17.66■□□□□ 0.42
SPCS1-201ENST00000233025 NUMA1Q14980 2115 aa17.66■□□□□ 0.42
SPCS1-201ENST00000233025 AHCTF1Q8WYP5 2266 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 LRRK2Q5S007 2527 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 ERVH48-1M5A8F1 160 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 SLC16A4O15374 487 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 CLDN3O15551 220 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 FAM189A1O60320 539 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 FDPSP14324 419 aaKnown RBP17.65■□□□□ 0.42
SPCS1-201ENST00000233025 HOXB2P14652 356 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 HDCP19113 662 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 ANAPC15P60006 121 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 WDR45BQ5MNZ6 344 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 WSCD1Q658N2 575 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 TRMT11Q7Z4G4 463 aaKnown RBP17.65■□□□□ 0.42
SPCS1-201ENST00000233025 METTL23Q86XA0 190 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 KCNV2Q8TDN2 545 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 RHBDD1Q8TEB9 315 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 LEO1Q8WVC0 666 aaPredicted RBP17.65■□□□□ 0.42
SPCS1-201ENST00000233025 DNASE2BQ8WZ79 361 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 TSPAN18Q96SJ8 248 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 ORC3Q9UBD5 711 aaPredicted RBP17.65■□□□□ 0.42
SPCS1-201ENST00000233025 NFE2L3Q9Y4A8 694 aa17.65■□□□□ 0.42
SPCS1-201ENST00000233025 NBPF19A0A087WUL8 3843 aa17.64■□□□□ 0.41
SPCS1-201ENST00000233025 CYB561D2O14569 222 aa17.64■□□□□ 0.41
SPCS1-201ENST00000233025 MATKP42679 507 aa17.64■□□□□ 0.41
SPCS1-201ENST00000233025 ATP2C1P98194 919 aaPredicted RBP17.64■□□□□ 0.41
SPCS1-201ENST00000233025 RHBDF2Q6PJF5 856 aa17.64■□□□□ 0.41
SPCS1-201ENST00000233025 MIB1Q86YT6 1006 aa17.64■□□□□ 0.41
SPCS1-201ENST00000233025 ZCCHC9Q8N567 271 aaKnown RBP17.64■□□□□ 0.41
SPCS1-201ENST00000233025 FAM181AQ8N9Y4 354 aa17.64■□□□□ 0.41
SPCS1-201ENST00000233025 SNIP1Q8TAD8 396 aaKnown RBP17.64■□□□□ 0.41
SPCS1-201ENST00000233025 PYM1Q9BRP8 204 aaKnown RBP17.64■□□□□ 0.41
SPCS1-201ENST00000233025 CCSER1Q9C0I3 900 aa17.64■□□□□ 0.41
SPCS1-201ENST00000233025 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.63■□□□□ 0.41
SPCS1-201ENST00000233025 RRP8O43159 456 aaKnown RBP17.63■□□□□ 0.41
SPCS1-201ENST00000233025 TNFSF14O43557 240 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 NFICP08651 508 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 CYP2F1P24903 491 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 RPL10AP62906 217 aaKnown RBP17.63■□□□□ 0.41
SPCS1-201ENST00000233025 MYO1EQ12965 1108 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 STRN3Q13033 797 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 NFE2Q16621 373 aaPredicted RBP17.63■□□□□ 0.41
SPCS1-201ENST00000233025 HLA-BQ31612 363 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 HAUS3Q68CZ6 603 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 JADE1Q6IE81 842 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 DHRS13Q6UX07 377 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 FSIP1Q8NA03 581 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 TMEM161BQ8NDZ6 487 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 DRC1Q96MC2 740 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 NTPCRQ9BSD7 190 aaKnown RBP17.63■□□□□ 0.41
SPCS1-201ENST00000233025 C17orf75Q9HAS0 396 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 ABCB6Q9NP58 842 aa17.63■□□□□ 0.41
SPCS1-201ENST00000233025 BTBD18B2RXH4 712 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 SCAMP3O14828 347 aaKnown RBP17.62■□□□□ 0.41
SPCS1-201ENST00000233025 NDUFS2O75306 463 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 WISP1O95388 367 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 ADH1CP00326 375 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 MAPTP10636 758 aaKnown RBP17.62■□□□□ 0.41
SPCS1-201ENST00000233025 ADH5P11766 374 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 PDE6CP51160 858 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 SEMG2Q02383 582 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 ME3Q16798 604 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 IL27RAQ6UWB1 636 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 TMPRSS12Q86WS5 348 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 ETFBKMTQ8IXQ9 262 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 NECAB1Q8N987 351 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 GTF3C6Q969F1 213 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 RUSC1Q9BVN2 902 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 SEMA4CQ9C0C4 833 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 BRMS1Q9HCU9 246 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.62■□□□□ 0.41
SPCS1-201ENST00000233025 CKAP5Q14008 2032 aa17.62■□□□□ 0.41
SPCS1-201ENST00000233025 B8ZZF3 427 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 SLC9A3R1O14745 358 aaPredicted RBP17.61■□□□□ 0.41
SPCS1-201ENST00000233025 PFKLP17858 780 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 NTSR1P30989 418 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 MCM7P33993 719 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 WASP42768 502 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 TAF6P49848 677 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 VASPP50552 380 aaPredicted RBP17.61■□□□□ 0.41
SPCS1-201ENST00000233025 SLC7A9P82251 487 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 TSPY1Q01534 308 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 TLE3Q04726 772 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 ST3GAL1Q11201 340 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 ANKRD1Q15327 319 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 NSUN7Q8NE18 718 aaKnown RBP17.61■□□□□ 0.41
SPCS1-201ENST00000233025 IPO4Q8TEX9 1081 aaKnown RBP17.61■□□□□ 0.41
SPCS1-201ENST00000233025 BAP1Q92560 729 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 WBP1Q96G27 269 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 PKMYT1Q99640 499 aa17.61■□□□□ 0.41
SPCS1-201ENST00000233025 SLC6A17Q9H1V8 727 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms