RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 UBL4BQ8N7F7 174 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 SLC4A11Q8NBS3 891 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 IPO4Q8TEX9 1081 aaKnown RBP10.3□□□□□ -0.76
TTC1-201ENST00000231238 GOLGA1Q92805 767 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 VCPIP1Q96JH7 1222 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 TNIP3Q96KP6 325 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 OSBPL9Q96SU4 736 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 MRPL45Q9BRJ2 306 aaKnown RBP10.3□□□□□ -0.76
TTC1-201ENST00000231238 TRAIPQ9BWF2 469 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 OSBPL7Q9BZF2 842 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 ELOVL4Q9GZR5 314 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 MIS12Q9H081 205 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 ST7Q9NRC1 585 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 HMGXB4Q9UGU5 601 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 CHORDC1Q9UHD1 332 aaPredicted RBP10.3□□□□□ -0.76
TTC1-201ENST00000231238 ANAPC7Q9UJX3 599 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 STRIP2Q9ULQ0 834 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 MYO1FO00160 1098 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 KCNK3O14649 394 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 B3GAT3O94766 335 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 KIF4AO95239 1232 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 PARNO95453 639 aaKnown RBP10.3□□□□□ -0.76
TTC1-201ENST00000231238 EOMESO95936 686 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 HSPA8P11142 646 aaKnown RBP10.3□□□□□ -0.76
TTC1-201ENST00000231238 EPXP11678 715 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 RRM1P23921 792 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 CXCR5P32302 372 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 CTCFP49711 727 aaPredicted RBP10.3□□□□□ -0.76
TTC1-201ENST00000231238 CCL23P55773 120 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 SLC8A3P57103 927 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 SNX16P57768 344 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 LILRA4P59901 499 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 GOLGA7BQ2TAP0 167 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 TRIM60Q495X7 471 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 MEI1Q5TIA1 1274 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 CCDC70Q6NSX1 233 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 DENND1BQ6P3S1 775 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 DCUN1D2Q6PH85 259 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 PHF13Q86YI8 300 aaPredicted RBP10.3□□□□□ -0.76
TTC1-201ENST00000231238 TOP6BLQ8N6T0 577 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 OLIG1Q8TAK6 271 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 TFAP2BQ92481 460 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 APBB2Q92870 758 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 CLP1Q92989 425 aaKnown RBP10.3□□□□□ -0.76
TTC1-201ENST00000231238 MYO19Q96H55 970 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 ZNF333Q96JL9 665 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 UROC1Q96N76 676 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 TWNKQ96RR1 684 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 GOLPH3Q9H4A6 298 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 AVENQ9NQS1 362 aaPredicted RBP10.3□□□□□ -0.76
TTC1-201ENST00000231238 FAM49BQ9NUQ9 324 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 PARVAQ9NVD7 372 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 GDAP2Q9NXN4 497 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 CXXC1Q9P0U4 656 aaPredicted RBP10.3□□□□□ -0.76
TTC1-201ENST00000231238 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.3□□□□□ -0.76
TTC1-201ENST00000231238 PACSIN2Q9UNF0 486 aaPredicted RBP10.3□□□□□ -0.76
TTC1-201ENST00000231238 PCDHB7Q9Y5E2 793 aa10.3□□□□□ -0.76
TTC1-201ENST00000231238 V9GYY5 206 aaPredicted RBP10.3□□□□□ -0.76
TTC1-201ENST00000231238 TGFBR3LH3BV60 316 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 MICAL2O94851 1124 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 ODC1P11926 461 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 PRLRP16471 622 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 HOXB4P17483 251 aaPredicted RBP10.29□□□□□ -0.76
TTC1-201ENST00000231238 DESP17661 470 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 GRNP28799 593 aaKnown RBP10.29□□□□□ -0.76
TTC1-201ENST00000231238 CLCNKBP51801 687 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 TUBB4BP68371 445 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 TLE2Q04725 743 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 TUSC3Q13454 348 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 MBTPS1Q14703 1052 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 CNGA2Q16280 664 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 SOWAHAQ2M3V2 549 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 CFAP221Q4G0U5 840 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 C2CD6Q53TS8 623 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 ODF2Q5BJF6 829 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 NOMO2Q5JPE7 1267 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 ZFYVE27Q5T4F4 411 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 C11orf63Q6NUN7 778 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 MON1BQ7L1V2 547 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 DEFB128Q7Z7B8 93 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 DBF4BQ8NFT6 615 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 UBA3Q8TBC4 463 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 RPGRIP1Q96KN7 1286 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 SENP8Q96LD8 212 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 MED10Q9BTT4 135 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 LHX5Q9H2C1 402 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 TMEM39AQ9NV64 488 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 KANSL3Q9P2N6 904 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 TSPAN16Q9UKR8 245 aa10.29□□□□□ -0.76
TTC1-201ENST00000231238 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.29□□□□□ -0.76
TTC1-201ENST00000231238 FRMPD3Q5JV73 1810 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 EFCAB8A8MWE9 144 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 MIF4GDA9UHW6 222 aaKnown RBP10.28□□□□□ -0.76
TTC1-201ENST00000231238 C9IYK1 514 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 GOLGA8SH3BPF8 625 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 O00370 1275 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 DYNC1I1O14576 645 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 ZNF185O15231 689 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 CEP104O60308 925 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 MMP8P22894 467 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms