RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 GCNT1Q02742 428 aa14.54□□□□□ -0.08
VEGFA-201ENST00000230480 TYRO3Q06418 890 aa14.54□□□□□ -0.08
VEGFA-201ENST00000230480 MAN2A1Q16706 1144 aa14.54□□□□□ -0.08
VEGFA-201ENST00000230480 TCP11X2Q5H9J9 407 aa14.54□□□□□ -0.08
VEGFA-201ENST00000230480 SNX30Q5VWJ9 437 aa14.54□□□□□ -0.08
VEGFA-201ENST00000230480 CAVIN1Q6NZI2 390 aaKnown RBP14.54□□□□□ -0.08
VEGFA-201ENST00000230480 SCD5Q86SK9 330 aa14.54□□□□□ -0.08
VEGFA-201ENST00000230480 MFSD6LQ8IWD5 586 aa14.54□□□□□ -0.08
VEGFA-201ENST00000230480 ARL14EPQ8N8R7 260 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-201ENST00000230480 ZFYVE19Q96K21 471 aa14.54□□□□□ -0.08
VEGFA-201ENST00000230480 ZFRQ96KR1 1074 aaKnown RBP14.54□□□□□ -0.08
VEGFA-201ENST00000230480 HEXIM2Q96MH2 286 aaKnown RBP14.54□□□□□ -0.08
VEGFA-201ENST00000230480 NT5C1BQ96P26 610 aa14.54□□□□□ -0.08
VEGFA-201ENST00000230480 TUBGCP2Q9BSJ2 902 aa14.54□□□□□ -0.08
VEGFA-201ENST00000230480 NMUR1Q9HB89 426 aa14.54□□□□□ -0.08
VEGFA-201ENST00000230480 DMAP1Q9NPF5 467 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-201ENST00000230480 CHORDC1Q9UHD1 332 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-201ENST00000230480 MTF2Q9Y483 593 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-201ENST00000230480 USP3Q9Y6I4 520 aa14.54□□□□□ -0.08
VEGFA-201ENST00000230480 GTPBP10A4D1E9 387 aaKnown RBP14.53□□□□□ -0.08
VEGFA-201ENST00000230480 SOBPA7XYQ1 873 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 KCNJ18B7U540 433 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 FGFR1OPO95684 399 aaKnown RBP14.53□□□□□ -0.08
VEGFA-201ENST00000230480 FGF19O95750 216 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 GLULP15104 373 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 KIF11P52732 1056 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 KCNJ12Q14500 433 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 VWA3BQ502W6 1294 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 RAB41Q5JT25 222 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 PPM1KQ8N3J5 372 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 TMEM105Q8N8V8 129 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 FAM83CQ9BQN1 747 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 MED10Q9BTT4 135 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 NDST4Q9H3R1 872 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 DLGAP2Q9P1A6 1054 aa14.53□□□□□ -0.08
VEGFA-201ENST00000230480 LRRC10BA6NIK2 292 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 GREM1O60565 184 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 PSMC3P17980 439 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 YWHAQP27348 245 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 PLA2G5P39877 138 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 KLK7P49862 253 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 STARD6P59095 220 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 PDE4CQ08493 712 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 IQCB1Q15051 598 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 KRT31Q15323 416 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 KLHL40Q2TBA0 621 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 SLC44A4Q53GD3 710 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 TMEM270Q6UE05 265 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 DHX40Q8IX18 779 aaKnown RBP14.52□□□□□ -0.09
VEGFA-201ENST00000230480 SIX5Q8N196 739 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 FBXL6Q8N531 539 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 ANKRD52Q8NB46 1076 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 NDRG1Q92597 394 aaKnown RBP14.52□□□□□ -0.09
VEGFA-201ENST00000230480 PBXIP1Q96AQ6 731 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 FAM122AQ96E09 287 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 NAA15Q9BXJ9 866 aaKnown RBP14.52□□□□□ -0.09
VEGFA-201ENST00000230480 UBE2TQ9NPD8 197 aaPredicted RBP14.52□□□□□ -0.09
VEGFA-201ENST00000230480 HPS4Q9NQG7 708 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 ANO10Q9NW15 660 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 OBP2AQ9NY56 170 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 TAB2Q9NYJ8 693 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 GMIPQ9P107 970 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 CA14Q9ULX7 337 aa14.52□□□□□ -0.09
VEGFA-201ENST00000230480 EPHB6O15197 1021 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 TBX18O95935 607 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 FAM200BP0CF97 657 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 PNMA6AP0CW24 399 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-201ENST00000230480 ATP1A3P13637 1013 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 CD72P21854 359 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 TBXAS1P24557 533 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-201ENST00000230480 BRD2P25440 801 aaKnown RBP14.51□□□□□ -0.09
VEGFA-201ENST00000230480 GDI1P31150 447 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 MTIF2P46199 727 aaKnown RBP14.51□□□□□ -0.09
VEGFA-201ENST00000230480 TNK2Q07912 1038 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 ZNF268Q14587 947 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-201ENST00000230480 ZNF77Q15935 545 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 STX1AQ16623 288 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 GAB4Q2WGN9 574 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 LCLAT1Q6UWP7 414 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 GBP6Q6ZN66 633 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 PIGZQ86VD9 579 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 CREBRFQ8IUR6 639 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 WDTC1Q8N5D0 677 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 RBBP8NLQ8NC74 664 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-201ENST00000230480 CCDC150Q8NCX0 1101 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 UBA3Q8TBC4 463 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 SLC35F5Q8WV83 523 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 SHC3Q92529 594 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 P2RY11Q96G91 374 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 TRMT61BQ9BVS5 477 aaKnown RBP14.51□□□□□ -0.09
VEGFA-201ENST00000230480 UBXN6Q9BZV1 441 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 LINC00597Q9H2U6 94 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 CCSER2Q9H7U1 834 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 TRPV5Q9NQA5 729 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 HEBP1Q9NRV9 189 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 TDP1Q9NUW8 608 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 UXTQ9UBK9 157 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-201ENST00000230480 LIMA1Q9UHB6 759 aaKnown RBP14.51□□□□□ -0.09
VEGFA-201ENST00000230480 DACH1Q9UI36 760 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 CYTH4Q9UIA0 394 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms