RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 C1orf53Q5VUE5 145 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 IRGCQ6NXR0 463 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 FAM47EQ6ZV65 393 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 RCOR2Q8IZ40 523 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 TMEM161BQ8NDZ6 487 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 TAS1R2Q8TE23 839 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 NKD2Q969F2 451 aaPredicted RBP21.52■■□□□ 1.04
SNX3-201ENST00000230085 RBM41Q96IZ5 413 aaKnown RBP21.52■■□□□ 1.04
SNX3-201ENST00000230085 VPS11Q9H270 941 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 PSMC3IPQ9P2W1 217 aaPredicted RBP21.52■■□□□ 1.04
SNX3-201ENST00000230085 STOML1Q9UBI4 398 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 HAO1Q9UJM8 370 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 TBX20Q9UMR3 447 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 ARID2Q68CP9 1835 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 C17orf102A2RUQ5 167 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 FOXO6A8MYZ6 492 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 TM9SF1O15321 606 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 B4GALT4O60513 344 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 PQBP1O60828 265 aaKnown RBP21.51■■□□□ 1.03
SNX3-201ENST00000230085 TARSP26639 723 aaKnown RBP21.51■■□□□ 1.03
SNX3-201ENST00000230085 HOXC8P31273 242 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 CYP24A1Q07973 514 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 P3H1Q32P28 736 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 MARCH8Q5T0T0 291 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 LONP2Q86WA8 852 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 ALLCQ8N6M5 410 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 ZFAND2BQ8WV99 257 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 FAM136AQ96C01 138 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 NIFKQ9BYG3 293 aaKnown RBP21.51■■□□□ 1.03
SNX3-201ENST00000230085 TRPV6Q9H1D0 765 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 CNTN6Q9UQ52 1028 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 ASB3Q9Y575 518 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 SIGLEC16A6NMB1 481 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 TGDSO95455 350 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 GARTP22102 1010 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 ADAM17P78536 824 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 C1QBPQ07021 282 aaKnown RBP21.51■■□□□ 1.03
SNX3-201ENST00000230085 MTERF2Q49AM1 385 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 FYB2Q5VWT5 728 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 FAM126BQ8IXS8 530 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 ZNF276Q8N554 614 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 ZSWIM2Q8NEG5 633 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 GRID1Q9ULK0 1009 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 ATP11BQ9Y2G3 1177 aa21.51■■□□□ 1.03
SNX3-201ENST00000230085 ANKRD33BA6NCL7 494 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 SMAPO00193 183 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 TREHO43280 583 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 CAPN15O75808 1086 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 FAM155BO75949 473 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 NSFP46459 744 aaKnown RBP21.5■■□□□ 1.03
SNX3-201ENST00000230085 PTDSS1P48651 473 aaKnown RBP21.5■■□□□ 1.03
SNX3-201ENST00000230085 RTP1P59025 263 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 TLE2Q04725 743 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 PTPN11Q06124 597 aaPredicted RBP21.5■■□□□ 1.03
SNX3-201ENST00000230085 KLC1Q07866 573 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 TARBP2Q15633 366 aaKnown RBP21.5■■□□□ 1.03
SNX3-201ENST00000230085 TRIP13Q15645 432 aaPredicted RBP21.5■■□□□ 1.03
SNX3-201ENST00000230085 C4orf50Q6ZRC1 276 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 SV2AQ7L0J3 742 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 NLRP9Q7RTR0 991 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 OTOAQ7RTW8 1153 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 ANKRD33Q7Z3H0 272 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 CLNKQ7Z7G1 428 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 ZNF75CPQ92670 426 aaPredicted RBP21.5■■□□□ 1.03
SNX3-201ENST00000230085 CEP170P1Q96L14 293 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 FRMD8P1Q9BZ68 369 aaPredicted RBP21.5■■□□□ 1.03
SNX3-201ENST00000230085 DENND2DQ9H6A0 471 aaPredicted RBP21.5■■□□□ 1.03
SNX3-201ENST00000230085 SLC24A3Q9HC58 644 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 SAYSD1Q9NPB0 183 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 CYP26B1Q9NR63 512 aa21.5■■□□□ 1.03
SNX3-201ENST00000230085 CCDC22O60826 627 aa21.49■■□□□ 1.03
SNX3-201ENST00000230085 ITGAVP06756 1048 aa21.49■■□□□ 1.03
SNX3-201ENST00000230085 KRT72Q14CN4 511 aa21.49■■□□□ 1.03
SNX3-201ENST00000230085 XKR9Q5GH70 373 aa21.49■■□□□ 1.03
SNX3-201ENST00000230085 ZNF484Q5JVG2 852 aa21.49■■□□□ 1.03
SNX3-201ENST00000230085 RNASEH2BQ5TBB1 312 aaKnown RBP21.49■■□□□ 1.03
SNX3-201ENST00000230085 PCGF5Q86SE9 256 aa21.49■■□□□ 1.03
SNX3-201ENST00000230085 DNAJC9Q8WXX5 260 aa21.49■■□□□ 1.03
SNX3-201ENST00000230085 PWWP2AQ96N64 755 aa21.49■■□□□ 1.03
SNX3-201ENST00000230085 SEZ6LQ9BYH1 1024 aa21.49■■□□□ 1.03
SNX3-201ENST00000230085 PCDH9Q9HC56 1237 aa21.49■■□□□ 1.03
SNX3-201ENST00000230085 ANKFY1Q9P2R3 1169 aa21.49■■□□□ 1.03
SNX3-201ENST00000230085 EFR3BQ9Y2G0 817 aa21.49■■□□□ 1.03
SNX3-201ENST00000230085 LRCH1Q9Y2L9 728 aa21.49■■□□□ 1.03
SNX3-201ENST00000230085 RRN3P2A6NIE6 340 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 TROVE2P10155 538 aaKnown RBP eCLIP21.48■■□□□ 1.03
SNX3-201ENST00000230085 GNAT1P11488 350 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 RPA3P35244 121 aaPredicted RBP21.48■■□□□ 1.03
SNX3-201ENST00000230085 VHLP40337 213 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 OASLQ15646 514 aaKnown RBP21.48■■□□□ 1.03
SNX3-201ENST00000230085 CENPUQ71F23 418 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 SLCO1B3Q9NPD5 702 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 C1orf112Q9NSG2 853 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 DNAJC17Q9NVM6 304 aaKnown RBP21.48■■□□□ 1.03
SNX3-201ENST00000230085 ZFP69BQ9UJL9 534 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 POLIQ9UNA4 740 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 EVPLQ92817 2033 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 LRRD1A4D1F6 860 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 SKAP2O75563 359 aaPredicted RBP21.48■■□□□ 1.03
SNX3-201ENST00000230085 TJP3O95049 919 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms