RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 RAB6BQ9NRW1 208 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 NXF1Q9UBU9 619 aaKnown RBP13.18□□□□□ -0.3
PITRM1-201ENST00000224949 NRAPQ86VF7 1730 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 COL24A1Q17RW2 1714 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 A6NJR5 290 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 EXTL3O43909 919 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 ZC3H11AO75152 810 aaKnown RBP eCLIP13.18□□□□□ -0.3
PITRM1-201ENST00000224949 PGM3O95394 542 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 CALB1P05937 261 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 C6orf222P0C671 652 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-201ENST00000224949 MMRN1Q13201 1228 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 TMEM35BQ8NCS4 154 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 JOSD2Q8TAC2 188 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 NKD2Q969F2 451 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-201ENST00000224949 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 ST6GALNAC4Q9H4F1 302 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 ARHGEF4Q9NR80 690 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 TAGLN3Q9UI15 199 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 FARP1Q9Y4F1 1045 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-201ENST00000224949 ZNF541Q9H0D2 1346 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 IL1R2P27930 398 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 CCNFP41002 786 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 OSTNP61366 133 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 DYNC1I2Q13409 638 aaKnown RBP13.18□□□□□ -0.3
PITRM1-201ENST00000224949 HIC1Q14526 733 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-201ENST00000224949 IFT43Q96FT9 208 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 MMP19Q99542 508 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 CLIC5Q9NZA1 410 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 STRIP2Q9ULQ0 834 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 HEY1Q9Y5J3 304 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 EP400Q96L91 3159 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 ANKRD33BA6NCL7 494 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 C4BPAP04003 597 aaKnown RBP13.17□□□□□ -0.3
PITRM1-201ENST00000224949 KRT3P12035 628 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 USP4Q13107 963 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 MED21Q13503 144 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 KRT72Q14CN4 511 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 TRIP10Q15642 601 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 HADHQ16836 314 aaKnown RBP13.17□□□□□ -0.3
PITRM1-201ENST00000224949 TRMT5Q32P41 509 aaKnown RBP13.17□□□□□ -0.3
PITRM1-201ENST00000224949 RALGPS1Q5JS13 557 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 TCHHL1Q5QJ38 904 aaPredicted RBP13.17□□□□□ -0.3
PITRM1-201ENST00000224949 DACT2Q5SW24 774 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 NDUFAF2Q8N183 169 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 LARGE2Q8N3Y3 721 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 SLC35B2Q8TB61 432 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 MZB1Q8WU39 189 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 ZFAND2BQ8WV99 257 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 FBXL18Q96ME1 805 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 DDX56Q9NY93 547 aaKnown RBP13.17□□□□□ -0.3
PITRM1-201ENST00000224949 CXorf49A8MYA2 514 aaPredicted RBP13.17□□□□□ -0.3
PITRM1-201ENST00000224949 ZNF862O60290 1169 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 LYPLA1O75608 230 aaPredicted RBP13.17□□□□□ -0.3
PITRM1-201ENST00000224949 ZMPSTE24O75844 475 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 KRT37O76014 449 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 DPYSL3Q14195 570 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 LIN52Q52LA3 116 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 ATG16L1Q676U5 607 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 DEPTORQ8TB45 409 aa13.17□□□□□ -0.3
PITRM1-201ENST00000224949 SYTL5Q8TDW5 730 aaPredicted RBP13.17□□□□□ -0.3
PITRM1-201ENST00000224949 ZNF668Q96K58 619 aaPredicted RBP13.17□□□□□ -0.3
PITRM1-201ENST00000224949 MMADHCQ9H3L0 296 aaPredicted RBP13.17□□□□□ -0.3
PITRM1-201ENST00000224949 SSU72Q9NP77 194 aaKnown RBP13.17□□□□□ -0.3
PITRM1-201ENST00000224949 K7ERI5 159 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 DNAJC6O75061 913 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 TM7SF2O76062 418 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 CST3P01034 146 aaPredicted RBP13.16□□□□□ -0.3
PITRM1-201ENST00000224949 APRTP07741 180 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 NCF2P19878 526 aaPredicted RBP13.16□□□□□ -0.3
PITRM1-201ENST00000224949 ETV4P43268 484 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 PSMC1P62191 440 aaKnown RBP13.16□□□□□ -0.3
PITRM1-201ENST00000224949 PIGHQ14442 188 aaPredicted RBP13.16□□□□□ -0.3
PITRM1-201ENST00000224949 SPDYAQ5MJ70 313 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 C16orf46Q6P387 395 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 DRICH1Q6PGQ1 229 aaPredicted RBP13.16□□□□□ -0.3
PITRM1-201ENST00000224949 DENND5BQ6ZUT9 1274 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 VCPIP1Q96JH7 1222 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 SPATA16Q9BXB7 569 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 ZC3H7BQ9UGR2 993 aaKnown RBP13.16□□□□□ -0.3
PITRM1-201ENST00000224949 FBXO40Q9UH90 709 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 PCDHA10Q9Y5I2 948 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 FOCADQ5VW36 1801 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 OR6B1O95007 311 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 KRT19P08727 400 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 GARTP22102 1010 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 JAK3P52333 1124 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 TMEM132AQ24JP5 1023 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 MMEL1Q495T6 779 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 RABGAP1LQ5R372 815 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 STRIP1Q5VSL9 837 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 SCYL2Q6P3W7 929 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 TAS1R3Q7RTX0 852 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 NET1Q7Z628 596 aaPredicted RBP13.16□□□□□ -0.3
PITRM1-201ENST00000224949 FAM160B2Q86V87 743 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.16□□□□□ -0.3
PITRM1-201ENST00000224949 TMEM39BQ9GZU3 492 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 UBIAD1Q9Y5Z9 338 aa13.16□□□□□ -0.3
PITRM1-201ENST00000224949 ATXN3P54252 364 aaPredicted RBP13.16□□□□□ -0.3
PITRM1-201ENST00000224949 TFAMQ00059 246 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms