RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 NPTXRO95502 500 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 TAC1P20366 129 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 SLC26A2P50443 739 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 LONP2Q86WA8 852 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 CFAP61Q8NHU2 1237 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 LRRN4Q8WUT4 740 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 NUDCD1Q96RS6 583 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 PPP1R12CQ9BZL4 782 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 RASSF9O75901 435 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 SAT1P21673 171 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 SESN2P58004 480 aaPredicted RBP15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 LRRC6Q86X45 466 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 NUDCD3Q8IVD9 361 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 CDKL3Q8IVW4 592 aaPredicted RBP15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 DNAAF3Q8N9W5 541 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 RNF169Q8NCN4 708 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 STAMBPL1Q96FJ0 436 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 GPR20Q99678 358 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 FRMD8P1Q9BZ68 369 aaPredicted RBP15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 PDLIM7Q9NR12 457 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 STYXL1Q9Y6J8 313 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 XPOTO43592 962 aaKnown RBP15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 NCALDP61601 193 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 ATG16L1Q676U5 607 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 CHADLQ6NUI6 762 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 RHBDF2Q6PJF5 856 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 POLNQ7Z5Q5 900 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 ZNF75CPQ92670 426 aaPredicted RBP15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 RMDN2Q96LZ7 410 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 MYLK2Q9H1R3 596 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 PDGFCQ9NRA1 345 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 BARX2Q9UMQ3 279 aaPredicted RBP15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 ARHGAP42A6NI28 874 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 CETPP11597 493 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 IVDP26440 423 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 ERFP50548 548 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 KLF1Q13351 362 aaPredicted RBP15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 LAMC2Q13753 1193 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 DPYSL3Q14195 570 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 ANKRD22Q5VYY1 191 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 MTDHQ86UE4 582 aaKnown RBP15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 SCUBE3Q8IX30 993 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 TMEM192Q8IY95 271 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 NSMCE1Q8WV22 266 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 CLMNQ96JQ2 1002 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 CYP3A43Q9HB55 503 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 PCMTD2Q9NV79 361 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 SMAPO00193 183 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 ERBB2P04626 1255 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 PYGBP11216 843 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 TAF5Q15542 800 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 MROH9Q5TGP6 573 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 SIX6OS1Q8N1H7 587 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 AGGF1Q8N302 714 aaeCLIP15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 FITM2Q8N6M3 262 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 SMC1BQ8NDV3 1235 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 PPP4R1Q8TF05 950 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 NKD2Q969F2 451 aaPredicted RBP15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 GCOM2Q9BZD3 368 aaPredicted RBP15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 TNFSF13BQ9Y275 285 aa15.59■□□□□ 0.09
UBE2D4-201ENST00000222402 STBD1O95210 358 aa15.58■□□□□ 0.09
UBE2D4-201ENST00000222402 ANP32DO95626 131 aa15.58■□□□□ 0.09
UBE2D4-201ENST00000222402 RAD23BP54727 409 aa15.58■□□□□ 0.09
UBE2D4-201ENST00000222402 AP1B1Q10567 949 aa15.58■□□□□ 0.09
UBE2D4-201ENST00000222402 MPP2Q14168 576 aa15.58■□□□□ 0.09
UBE2D4-201ENST00000222402 STILQ15468 1287 aa15.58■□□□□ 0.09
UBE2D4-201ENST00000222402 CRLF3Q8IUI8 442 aa15.58■□□□□ 0.09
UBE2D4-201ENST00000222402 C12orf29Q8N999 325 aa15.58■□□□□ 0.09
UBE2D4-201ENST00000222402 C1orf127Q8N9H9 656 aa15.58■□□□□ 0.09
UBE2D4-201ENST00000222402 USP2O75604 605 aaPredicted RBP15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 CBX6O95503 412 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 SNRPAP09012 282 aaKnown RBP15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 CCND1P24385 295 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 ELF1P32519 619 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 GDF10P55107 478 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 ZNF484Q5JVG2 852 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 RNASEH2BQ5TBB1 312 aaKnown RBP15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 C12orf65Q9H3J6 166 aaKnown RBP15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 HEY2Q9UBP5 337 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 LGALS13Q9UHV8 139 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 B4GALT4O60513 344 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 MCF2P10911 925 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 KLRC2P26717 231 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 NRLP54845 237 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 IFRD2Q12894 506 aaPredicted RBP15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 NME3Q13232 169 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 KYAT1Q16773 422 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 KBTBD12Q3ZCT8 623 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 TAF1BQ53T94 588 aaPredicted RBP15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 RFX8Q6ZV50 586 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 ZNF354CQ86Y25 554 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 ARMC2Q8NEN0 867 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 FAM167BQ9BTA0 163 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 ASB7Q9H672 318 aa15.58■□□□□ 0.08
UBE2D4-201ENST00000222402 ANKRD31Q8N7Z5 1873 aa15.57■□□□□ 0.08
UBE2D4-201ENST00000222402 GPR25O00155 361 aa15.57■□□□□ 0.08
UBE2D4-201ENST00000222402 HUS1O60921 280 aa15.57■□□□□ 0.08
UBE2D4-201ENST00000222402 ARIH2O95376 493 aa15.57■□□□□ 0.08
UBE2D4-201ENST00000222402 BAG2O95816 211 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms