RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 TSC22D4Q9Y3Q8 395 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 SQORQ9Y6N5 450 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 A0A087X1B8 175 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 FAM95CA0A1B0GW59 222 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 PRAMEF22A3QJZ6 481 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 PRR23AA6NEV1 266 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 CHADO15335 359 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 NMT2O60551 498 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 NPTXRO95502 500 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 PTGER2P43116 358 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 OAZ1P54368 228 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 RAD23AP54725 363 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 VCPP55072 806 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 ITGA1P56199 1179 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 C1DQ13901 141 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 USP10Q14694 798 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 NCF4Q15080 339 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 RASA2Q15283 850 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 CLEC16AQ2KHT3 1053 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 TIMM50Q3ZCQ8 353 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 LRRC38Q5VT99 294 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 C1orf228Q6PIY5 440 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 KATNAL2Q8IYT4 538 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 RDH11Q8TC12 318 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 PDCD6IPQ8WUM4 868 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 SLC20A1Q8WUM9 679 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 ARL8AQ96BM9 186 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 ELMO2Q96JJ3 720 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 VAT1Q99536 393 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.57□□□□□ -1.68
CHD9-201ENST00000219084 C6orf203Q9P0P8 240 aaPredicted RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 UBA2Q9UBT2 640 aaPredicted RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 POLG2Q9UHN1 485 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 LOC102724159A0A0B4J2E5 919 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 SMIM31A0A1B0GVY4 71 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 C2orf81A6NN90 581 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 STX7O15400 261 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 HBP1O60381 514 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 DNAJC6O75061 913 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 PAEPP09466 180 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 NUDT17P0C025 328 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 CCDC130P13994 396 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 KLRC1P26715 233 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 OXCT1P55809 520 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 HERVK_113P62684 666 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 SFSWAPQ12872 951 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 BFSP2Q13515 415 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 PWP2Q15269 919 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 DEPDC1Q5TB30 811 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 CYP4Z1Q86W10 505 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 TAB3Q8N5C8 712 aaPredicted RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 SLC10A4Q96EP9 437 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 TMA16Q96EY4 203 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 CGRRF1Q99675 332 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 A1CFQ9NQ94 594 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 TBC1D13Q9NVG8 400 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 COMMD8Q9NX08 183 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 PPP2R3BQ9Y5P8 575 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 MYO18AQ92614 2054 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 NID2Q14112 1375 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 PDZK1P1A8MUH7 402 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 TRIM66O15016 1216 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 RIPK2O43353 540 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 AHCYL1O43865 530 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 ODC1P11926 461 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 TARSP26639 723 aaKnown RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 UBXN2AP68543 259 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 R3HDM1Q15032 1099 aaKnown RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 ZNF484Q5JVG2 852 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 SAMD4BQ5PRF9 694 aaKnown RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 LRRC74BQ6ZQY2 392 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 PID1Q7Z2X4 250 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 CATSPER3Q86XQ3 398 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 SLC7A14Q8TBB6 771 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 TMEM245Q9H330 911 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 UNC45AQ9H3U1 944 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.56□□□□□ -1.682e-6■□□□□ 8.1
CHD9-201ENST00000219084 LSM7Q9UK45 103 aaKnown RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 TRHDEQ9UKU6 1024 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 PCDHA3Q9Y5H8 950 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 SFI1A8K8P3 1242 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 TRIM24O15164 1050 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 HLA-DRAP01903 254 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 SERPINE1P05121 402 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 PGAM1P18669 254 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 HOXD10P28358 340 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 RRM2P31350 389 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 CHRNB3Q05901 458 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 ST3GAL1Q11201 340 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 ATF7IP2Q5U623 682 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 IKBIPQ70UQ0 350 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 SLC24A3Q9HC58 644 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 TMEM260Q9NX78 707 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 RGPD2P0DJD1 1756 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 FOXN1O15353 648 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 PROSCO94903 275 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 ARIH2O95376 493 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 CYP2D6P10635 497 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 PRKCIP41743 596 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 WDR72Q3MJ13 1102 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms