RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 KCNK16Q96T55 309 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 PAFAH2Q99487 392 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 M0R3G1 203 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 AKAP3O75969 853 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 ALDH1A1P00352 501 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 ETS1P14921 441 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 NPTX2P47972 431 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 MAPRE1Q15691 268 aaKnown RBP14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 PRPF18Q99633 342 aaKnown RBP14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 SEMA4AQ9H3S1 761 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 SYTL2Q9HCH5 934 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 A0A087X0B3 334 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 EIF3DO15371 548 aaKnown RBP eCLIP14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 SERPINB9P50453 376 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 POU6F1Q14863 301 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 EFCAB3Q8N7B9 438 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 PGLYRP2Q96PD5 576 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 CATSPERBQ9H7T0 1116 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 GPRC5DQ9NZD1 345 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 NBNO60934 754 aa14.08□□□□□ -0.15
TGFBR3-201ENST00000212355 USP1O94782 785 aa14.08□□□□□ -0.15
TGFBR3-201ENST00000212355 CXCL8P10145 99 aa14.08□□□□□ -0.15
TGFBR3-201ENST00000212355 PLEKHA8Q96JA3 519 aa14.08□□□□□ -0.15
TGFBR3-201ENST00000212355 SEPHS2Q99611 448 aa14.08□□□□□ -0.15
TGFBR3-201ENST00000212355 ACP6Q9NPH0 428 aa14.08□□□□□ -0.15
TGFBR3-201ENST00000212355 SELENONQ9NZV5 590 aa14.08□□□□□ -0.15
TGFBR3-201ENST00000212355 H2AFY2Q9P0M6 372 aaPredicted RBP14.08□□□□□ -0.15
TGFBR3-201ENST00000212355 CHI3L1P36222 383 aaPredicted RBP14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 HARS2P49590 506 aaKnown RBP14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 EFEMP1Q12805 493 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 FBXO33Q7Z6M2 555 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 TDRD5Q8NAT2 981 aaKnown RBP14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 AKT1S1Q96B36 256 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 SEMA6AQ9H2E6 1030 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 NUDT5Q9UKK9 219 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 CLASP2O75122 1294 aaKnown RBP14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 ZC3H11AO75152 810 aaKnown RBP eCLIP14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 BANF1O75531 89 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 CDH18Q13634 790 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 PCYOX1LQ8NBM8 494 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 PLA2G12BQ9BX93 195 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 TRIM45Q9H8W5 580 aaPredicted RBP14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 ATN1P54259 1190 aaPredicted RBP14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 CDH8P55286 799 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 IFI35P80217 286 aaPredicted RBP14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 MICU2Q8IYU8 434 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 SLC5A5Q92911 643 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 NT5MQ9NPB1 228 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 NYAP2Q9P242 653 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 PACSIN3Q9UKS6 424 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 USP18Q9UMW8 372 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 OVOS2A0A0G2JMS6 1433 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 OVOS2A0A0J9YW53 1432 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 OVOS2Q6IE36 1432 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 WDR27A2RRH5 827 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 POMCP01189 267 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 CEP78Q5JTW2 689 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 IER5Q5VY09 327 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 GPBP1L1Q9HC44 474 aaPredicted RBP14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 SCUBE2Q9NQ36 999 aa14.08□□□□□ -0.16
TGFBR3-201ENST00000212355 LZTS3O60299 673 aaPredicted RBP14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 PDE5AO76074 875 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 B3GAT3O94766 335 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 BAIAP3O94812 1187 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 CELF2O95319 508 aaKnown RBP14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 KRT8P05787 483 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 DGKDQ16760 1214 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 EDRF1Q3B7T1 1238 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 SAPCD2Q86UD0 394 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 B3GALNT2Q8NCR0 500 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 CATSPER1Q8NEC5 780 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 CCDC134Q9H6E4 229 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 KCNQ5Q9NR82 932 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 LSM7Q9UK45 103 aaKnown RBP14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 STRNO43815 780 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 VHLP40337 213 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 CENPCQ03188 943 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 TEX9Q8N6V9 391 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 SNX8Q9Y5X2 465 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 CYB561D2O14569 222 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 ALBP02768 609 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 ZSCAN5DPP0CG00 497 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 CCDC15Q0P6D6 951 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 DENND1BQ6P3S1 775 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 KDM7AQ6ZMT4 941 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 SH3TC2Q8TF17 1288 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 PHF21AQ96BD5 680 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 ERAP1Q9NZ08 941 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 WDR35Q9P2L0 1181 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 IL18RAPO95256 599 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 STAG3L1P0CL83 205 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 SERPINB10P48595 397 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 ARL4DP49703 201 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 TROAPQ12815 778 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 RASA2Q15283 850 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 CYP51A1Q16850 503 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 TFDP3Q5H9I0 405 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 PDPK2PQ6A1A2 396 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 ASZ1Q8WWH4 475 aa14.07□□□□□ -0.16
TGFBR3-201ENST00000212355 DNAJC7Q99615 494 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms