RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 FSCN2O14926 492 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CAPN15O75808 1086 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 LCP1P13796 627 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PDGFRAP16234 1089 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ACADSBP45954 432 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 OR1G1P47890 313 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ACAP1Q15027 740 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 OVOS1Q6IE37 1185 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 POLNQ7Z5Q5 900 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 DEFB128Q7Z7B8 93 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 FAM35AQ86V20 835 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CASD1Q96PB1 797 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 FAM193BQ96PV7 902 aaPredicted RBP20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CNPY3Q9BT09 278 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PRG3Q9Y2Y8 225 aaPredicted RBP20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 AGPSO00116 658 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 FAM200BP0CF97 657 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 IL1R2P27930 398 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 TNFRSF8P28908 595 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PPP2R5EQ16537 467 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ANKS1BQ7Z6G8 1248 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 OR10T2Q8NGX3 314 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 EXOC4Q96A65 974 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 TMEM30AQ9NV96 361 aa20.65■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PATJQ8NI35 1801 aa20.64■□□□□ 0.89
TNFRSF1A-201ENST00000162749 PHF2O75151 1096 aa20.64■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RARAP10276 462 aa20.64■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RALAP11233 206 aa20.64■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TYMPP19971 482 aa20.64■□□□□ 0.89
TNFRSF1A-201ENST00000162749 INTS6LQ5JSJ4 861 aaKnown RBP20.64■□□□□ 0.89
TNFRSF1A-201ENST00000162749 SH3PXD2AQ5TCZ1 1133 aa20.64■□□□□ 0.89
TNFRSF1A-201ENST00000162749 FAM171BQ6P995 826 aa20.64■□□□□ 0.89
TNFRSF1A-201ENST00000162749 SLC26A9Q7LBE3 791 aa20.64■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ACSF2Q96CM8 615 aaPredicted RBP20.64■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ASNSD1Q9NWL6 643 aa20.64■□□□□ 0.89
TNFRSF1A-201ENST00000162749 LRFN2Q9ULH4 789 aa20.64■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ARHGEF37A1IGU5 675 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ERICH4A6NGS2 130 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RNF8O76064 485 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 LBX1P52954 281 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 MAP3K7CLP57077 242 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ADIGQ0VDE8 80 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 KLF1Q13351 362 aaPredicted RBP20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CYP1B1Q16678 543 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 C15orf59Q2T9L4 293 aaPredicted RBP20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 HSP90B2PQ58FF3 399 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 SND1Q7KZF4 910 aaKnown RBP eCLIP20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ANKLE1Q8NAG6 615 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RNF25Q96BH1 459 aaPredicted RBP20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 PAWRQ96IZ0 340 aaKnown RBP20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CFAP57Q96MR6 1250 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 PKMYT1Q99640 499 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 NRDE2Q9H7Z3 1164 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 GDF3Q9NR23 364 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 MTUS1Q9ULD2 1270 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 LTBP2Q14767 1821 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ESYT3A0FGR9 886 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 PI4K2BG5E9Z4 385 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 MIPP30301 263 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 SCNN1AP37088 669 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CACNA2D1P54289 1103 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 GUCY2DQ02846 1103 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 YWHAHQ04917 246 aaPredicted RBP20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 KCTD19Q17RG1 926 aaPredicted RBP20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 SMTNL2Q2TAL5 461 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CCDC14Q49A88 953 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 KCNT1Q5JUK3 1230 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ZFYVE27Q5T4F4 411 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 MAATS1Q7Z4T9 603 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RIN2Q8WYP3 895 aaPredicted RBP20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 KCTD13Q8WZ19 329 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 MYLPFQ96A32 169 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RBM41Q96IZ5 413 aaKnown RBP20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 SLITRK1Q96PX8 696 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 SMOQ99835 787 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 HEMGNQ9BXL5 484 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 OSBPL8Q9BZF1 889 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 EPB41L5Q9HCM4 733 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 PCDHB8Q9UN66 801 aa20.63■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TTI1O43156 1089 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 AP1G2O75843 785 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 KRT1P04264 644 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 PCK1P35558 622 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 PKN2Q16513 984 aaKnown RBP20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 HADHQ16836 314 aaKnown RBP20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CDO1Q16878 200 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RAB6CQ53S08 254 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 NPAS4Q8IUM7 802 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RCOR2Q8IZ40 523 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ZMIZ2Q8NF64 920 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CCDC26Q8TAB7 109 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RAPGEF5Q92565 580 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 VWCEQ96DN2 955 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TMEM209Q96SK2 561 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 KCNK16Q96T55 309 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RAB6CQ9H0N0 254 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TMEM39AQ9NV64 488 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 DDX56Q9NY93 547 aaKnown RBP20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 PSD3Q9NYI0 1048 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 HCSTQ9UBK5 93 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms