RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 ARHGAP24Q8N264 748 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 EZH1Q92800 747 aaPredicted RBP17.47■□□□□ 0.39
CTDP1-201ENST00000075430 AGO4Q9HCK5 861 aaKnown RBP17.47■□□□□ 0.39
CTDP1-201ENST00000075430 SENP1Q9P0U3 644 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 SLC7A8Q9UHI5 535 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 SPATA31D3P0C874 917 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 IL1R2P27930 398 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 BPIFB4P59827 614 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 SPATA31D4Q6ZUB0 917 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 PPIL6Q8IXY8 311 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 ULK2Q8IYT8 1036 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 E2F7Q96AV8 911 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 PGBD4Q96DM1 585 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 PANX3Q96QZ0 392 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 EURLQ9NYK6 297 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 ANGPTL2Q9UKU9 493 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 UBE4BO95155 1302 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 ZNF541Q9H0D2 1346 aa17.47■□□□□ 0.39
CTDP1-201ENST00000075430 hCG_1818297A0A087WSY0 165 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 RNASEH1O60930 286 aaKnown RBP17.46■□□□□ 0.39
CTDP1-201ENST00000075430 PROCP04070 461 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 ASNSP08243 561 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 CDH6P55285 790 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 DSG1Q02413 1049 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 GALNT4Q8N4A0 578 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 FLAD1Q8NFF5 587 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 SLCO2A1Q92959 643 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 SCINQ9Y6U3 715 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 KCNN4O15554 427 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 ZNF862O60290 1169 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 NPTXRO95502 500 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 KRT3P12035 628 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 ZNF252P-AS1Q0IIN9 211 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 CES3Q6UWW8 571 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 MFN1Q8IWA4 741 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 ENDOVQ8N8Q3 282 aaKnown RBP17.46■□□□□ 0.39
CTDP1-201ENST00000075430 TRIM11Q96F44 468 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 RIT2Q99578 217 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 GORASP1Q9BQQ3 440 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 KCNK13Q9HB14 408 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 NGRNQ9NPE2 291 aaKnown RBP17.46■□□□□ 0.39
CTDP1-201ENST00000075430 ETNK2Q9NVF9 386 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 APPL1Q9UKG1 709 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 MTO1Q9Y2Z2 717 aaKnown RBP17.46■□□□□ 0.39
CTDP1-201ENST00000075430 ZNF536O15090 1300 aa17.46■□□□□ 0.39
CTDP1-201ENST00000075430 SYNJ2BP-COX16A0A087WUM0 186 aa17.46■□□□□ 0.38
CTDP1-201ENST00000075430 MCF2LO15068 1137 aa17.46■□□□□ 0.38
CTDP1-201ENST00000075430 DHX15O43143 795 aaKnown RBP17.46■□□□□ 0.38
CTDP1-201ENST00000075430 TCEA3O75764 348 aa17.46■□□□□ 0.38
CTDP1-201ENST00000075430 MUTP22033 750 aa17.46■□□□□ 0.38
CTDP1-201ENST00000075430 CAP2P40123 477 aa17.46■□□□□ 0.38
CTDP1-201ENST00000075430 BAATQ14032 418 aaPredicted RBP17.46■□□□□ 0.38
CTDP1-201ENST00000075430 PAOXQ6QHF9 649 aa17.46■□□□□ 0.38
CTDP1-201ENST00000075430 BANPQ8N9N5 519 aa17.46■□□□□ 0.38
CTDP1-201ENST00000075430 UBA3Q8TBC4 463 aa17.46■□□□□ 0.38
CTDP1-201ENST00000075430 NDNQ99608 321 aa17.46■□□□□ 0.38
CTDP1-201ENST00000075430 WDR83Q9BRX9 315 aaKnown RBP17.46■□□□□ 0.38
CTDP1-201ENST00000075430 RNF19AQ9NV58 838 aa17.46■□□□□ 0.38
CTDP1-201ENST00000075430 COX16Q9P0S2 106 aa17.46■□□□□ 0.38
CTDP1-201ENST00000075430 IRF6O14896 467 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 RTN3O95197 1032 aaPredicted RBP17.45■□□□□ 0.38
CTDP1-201ENST00000075430 AP2B1P63010 937 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 PSMD6Q15008 389 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 KLHL38Q2WGJ6 581 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 C11orf91Q3C1V1 193 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 MMEL1Q495T6 779 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 SATL1Q86VE3 508 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 CRLF3Q8IUI8 442 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 CEP70Q8NHQ1 597 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 VTI1AQ96AJ9 217 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 KCND2Q9NZV8 630 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 ZC3H7BQ9UGR2 993 aaKnown RBP17.45■□□□□ 0.38
CTDP1-201ENST00000075430 TTLL13PA6NNM8 815 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 NEMP1O14524 444 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 LIN7AO14910 233 aaPredicted RBP17.45■□□□□ 0.38
CTDP1-201ENST00000075430 CNPY1Q3B7I2 92 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 STRA6Q9BX79 667 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 SAR1AQ9NR31 198 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 MYH9P35579 1960 aaKnown RBP17.45■□□□□ 0.38
CTDP1-201ENST00000075430 ATRNL1Q5VV63 1379 aa17.45■□□□□ 0.38
CTDP1-201ENST00000075430 PEX1O43933 1283 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 VNN1O95497 513 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 DLDP09622 509 aaKnown RBP17.44■□□□□ 0.38
CTDP1-201ENST00000075430 DPEP1P16444 411 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 RGS7P49802 495 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 AP1B1Q10567 949 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 ACAP1Q15027 740 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 NFIL3Q16649 462 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 IL31Q6EBC2 164 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 SPATA24Q86W54 205 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 MAP4K3Q8IVH8 894 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 FAM136AQ96C01 138 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 UNKQ9C0B0 810 aaKnown RBP17.44■□□□□ 0.38
CTDP1-201ENST00000075430 ASCC2Q9H1I8 757 aaPredicted RBP17.44■□□□□ 0.38
CTDP1-201ENST00000075430 STX18Q9P2W9 335 aaKnown RBP17.44■□□□□ 0.38
CTDP1-201ENST00000075430 SLC24A2Q9UI40 661 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 LNPEPQ9UIQ6 1025 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 FEM1BQ9UK73 627 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 GOLGA8QA0A0J9YX86 632 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 GOLGA8OA6NCC3 632 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms