RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 ELP3Q9H9T3 547 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 WDR81Q562E7 1941 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 A0A087WZ62 844 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 TROVE2P10155 538 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDC27-201ENST00000066544 MCCD1P59942 119 aaPredicted RBP8.66□□□□□ -1.02
CDC27-201ENST00000066544 TTLL12Q14166 644 aaPredicted RBP8.66□□□□□ -1.02
CDC27-201ENST00000066544 DPYSL3Q14195 570 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 METTL7BQ6UX53 244 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 CCDC110Q8TBZ0 833 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 C10orf82Q8WW14 230 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 SERAC1Q96JX3 654 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 FDXACB1Q9BRP7 624 aaPredicted RBP8.66□□□□□ -1.02
CDC27-201ENST00000066544 AKT3Q9Y243 479 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 FARP1Q9Y4F1 1045 aaPredicted RBP8.66□□□□□ -1.02
CDC27-201ENST00000066544 COL11A1P12107 1806 aaPredicted RBP8.66□□□□□ -1.02
CDC27-201ENST00000066544 TCRBV9S1A1TA0A576 114 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 T-ENOLP0DO92 83 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 ATP2A2P16615 1042 aaKnown RBP8.66□□□□□ -1.02
CDC27-201ENST00000066544 GM2AP17900 193 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 ROR1Q01973 937 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 RELL1Q8IUW5 271 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 SLC4A11Q8NBS3 891 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 L3MBTL3Q96JM7 780 aaPredicted RBP8.66□□□□□ -1.02
CDC27-201ENST00000066544 RNPEPQ9H4A4 650 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 ACSS3Q9H6R3 686 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 SLC24A2Q9UI40 661 aa8.66□□□□□ -1.02
CDC27-201ENST00000066544 EVPLQ92817 2033 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 TRIM49D1C9J1S8 452 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 PRPF4O43172 522 aaKnown RBP eCLIP8.65□□□□□ -1.02
CDC27-201ENST00000066544 UGT1A9O60656 530 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 STAG3L1P0CL83 205 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 SERPINB3P29508 390 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 TMEM62Q0P6H9 643 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 RIPK1Q13546 671 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 TAF11Q15544 211 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 ANKRD20A2Q5SQ80 823 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 ANKRD20A1Q5TYW2 823 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 ANKRD20A3Q5VUR7 823 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 DRICH1Q6PGQ1 229 aaPredicted RBP8.65□□□□□ -1.02
CDC27-201ENST00000066544 LBX2Q6XYB7 198 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 ZNF570Q96NI8 536 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 MANSC1Q9H8J5 431 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 UGT1A7Q9HAW7 530 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 UGT1A10Q9HAW8 530 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 UGT1A8Q9HAW9 530 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 CENPFP49454 3210 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 SYNJ2BP-COX16A0A087WUM0 186 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 A0A1B0GUA9 196 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 PRPSAP2O60256 369 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 TOP3BO95985 862 aaKnown RBP8.65□□□□□ -1.02
CDC27-201ENST00000066544 TXNP10599 105 aaKnown RBP8.65□□□□□ -1.02
CDC27-201ENST00000066544 CCND1P24385 295 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 ABCD1P33897 745 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 MAP1SQ66K74 1059 aaPredicted RBP8.65□□□□□ -1.02
CDC27-201ENST00000066544 CLMNQ96JQ2 1002 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 B3GNT5Q9BYG0 378 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 COX16Q9P0S2 106 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 SENP1Q9P0U3 644 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 E2F8A0AVK6 867 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 HCRTO43612 131 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 DCTN3O75935 186 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 RBL1P28749 1068 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 NDST1P52848 882 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 TRNP1Q6NT89 227 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 RFWD3Q6PCD5 774 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 APBB1IPQ7Z5R6 666 aaPredicted RBP8.65□□□□□ -1.02
CDC27-201ENST00000066544 CHST13Q8NET6 341 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 DNERQ8NFT8 737 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 DTX3LQ8TDB6 740 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 SLC7A6OSQ96CW6 309 aaPredicted RBP8.65□□□□□ -1.02
CDC27-201ENST00000066544 C12orf42Q96LP6 360 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 CYTH2Q99418 400 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 TSSK1BQ9BXA7 367 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 ZNF518BQ9C0D4 1074 aa8.65□□□□□ -1.02
CDC27-201ENST00000066544 ACKR2O00590 384 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 CYB561D2O14569 222 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 ABLIM1O14639 778 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 IRF6O14896 467 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 MED7O43513 233 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 PAX7P23759 505 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 ICAM3P32942 547 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 ATXN1P54253 815 aaKnown RBP8.65□□□□□ -1.03
CDC27-201ENST00000066544 YARSP54577 528 aaKnown RBP8.65□□□□□ -1.03
CDC27-201ENST00000066544 MXD4Q14582 209 aaPredicted RBP8.65□□□□□ -1.03
CDC27-201ENST00000066544 CDHR3Q6ZTQ4 885 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 SCUBE3Q8IX30 993 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 TTC13Q8NBP0 860 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 HPDLQ96IR7 371 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 RAB3IPQ96QF0 476 aaPredicted RBP8.65□□□□□ -1.03
CDC27-201ENST00000066544 GPR20Q99678 358 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 HMGCRP04035 888 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 PDHA1P08559 390 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 RPS12P25398 132 aaKnown RBP8.65□□□□□ -1.03
CDC27-201ENST00000066544 TAP1Q03518 808 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 RCN2Q14257 317 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 CA9Q16790 459 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 KLHL38Q2WGJ6 581 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 Q3C1V9 767 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 GLRA4Q5JXX5 417 aa8.65□□□□□ -1.03
CDC27-201ENST00000066544 ACOT1Q86TX2 421 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms