RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Atg16l1Q8C0J2 607 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ldlrap1Q8C142 308 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Smtnl2Q8CI12 456 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Angel2Q8K1C0 544 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ciapin1Q8WTY4 309 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 PlvapQ91VC4 438 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Med7Q9CZB6 233 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ndc80Q9D0F1 642 aaKnown RBP13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 NumbQ9QZS3 653 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Tcp11x2A2AEI7 503 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Olfr1305A2AVW3 312 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Lrriq4A6H6A4 596 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Kpna7C0LLJ0 499 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Apol11aE9PZG0 334 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Svs3aF2Z472 265 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Pdcd2P46718 343 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 SnnP61807 88 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Psmc1P62192 440 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ikzf1Q03267 517 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ccnt2Q7TQK0 723 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Rhpn2Q8BWR8 686 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Svs3bQ8BZH8 265 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Adgra1Q8C4G9 578 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ablim1Q8K4G5 861 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Rpp40Q8R1F9 363 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 DolkQ8R2Y3 534 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Usp33Q8R5K2 909 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Sorcs3Q8VI51 1219 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Trpv6Q91WD2 767 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Fam192aQ91WE2 254 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Spats2lQ91WJ7 558 aaKnown RBP13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Nxf1Q99JX7 618 aaKnown RBP13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Mcrs1Q99L90 462 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Castor1Q9CWQ8 331 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Nt5c3aQ9D020 331 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 MceeQ9D1I5 178 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Kat2aQ9JHD2 830 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Cpsf3Q9QXK7 684 aa13.66□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Dhtkd1A2ATU0 921 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Rabgap1A2AWA9 1064 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Olfr456B2RT27 312 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Kbtbd2G3X9X1 623 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Vmn2r39L7N2E5 861 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Efna5O08543 228 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ift81O35594 676 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 DffaO54786 331 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Adam15O88839 864 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Il3P01586 166 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Lmnb1P14733 588 aaKnown RBP13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Gnat1P20612 350 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 RarbP22605 482 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 PrkcdP28867 674 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Crhr1P35347 415 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Slc1a2P43006 572 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Mxi1P50540 228 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Adamts10P58459 1104 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 YwhazP63101 245 aaKnown RBP13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Dlg3P70175 849 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Gm8773Q3UQ24 132 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Cage1Q5IR70 849 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Cacna2d2Q6PHS9 1154 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Sestd1Q80UK0 696 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Mettl21cQ8BLU2 248 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Enpp4Q8BTJ4 456 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Gbp9Q8BTS3 619 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Rsl1d1Q8BVY0 452 aaKnown RBP13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ccser1Q8C0C4 895 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 CntrobQ8CB62 887 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 OgtQ8CGY8 1046 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Adgrg2Q8CJ12 1009 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Fbxo33Q8VE08 562 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Olfr458Q8VF80 313 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Olfr457Q8VGP5 313 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Actr3Q99JY9 418 aaKnown RBP13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Oma1Q9D8H7 521 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Mrpl4Q9DCU6 294 aaKnown RBP13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Sfmbt1Q9JMD1 863 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ly6iQ9WU67 134 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Tnfsf13bQ9WU72 309 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Asb1Q9WV74 336 aa13.65□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ptpn3A2ALK8 913 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Arhgef10lA2AWP8 1280 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Mocs3A2BDX3 460 aaKnown RBP13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Plekha5E9Q6H8 1269 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Pdzd7E9Q9W7 1021 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Chil3O35744 398 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Stra6O70491 670 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Hoxc6P10629 235 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 ItgalP24063 1163 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Tfap2aP34056 437 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 YwhagP61982 247 aaKnown RBP13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 S100a5P63084 93 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Gpsm3Q3U1Z5 159 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 McuQ3UMR5 350 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ampd1Q3V1D3 745 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 CttnQ60598 546 aaKnown RBP13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Itih3Q61704 889 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Fam214aQ69ZK7 1075 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Tmcc1Q69ZZ6 649 aa13.64□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Zpbp2Q6X786 326 aa13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 53.6 ms