RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 FukQ7TMC8 1090 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Olfr26Q7TRB7 308 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cstf2Q8BIQ5 580 aaKnown RBP8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Ccdc122Q8BVN0 290 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Ccdc187Q8C5V8 958 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Pnma3Q8JZW8 466 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Taf10Q8K0H5 218 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Traf3ip2Q8N7N6 555 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Papd4Q91YI6 484 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Macrod1Q922B1 323 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Psmd6Q99JI4 389 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Lrrc17Q9CXD9 443 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Olfr933Q9EQA0 308 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Scamp5Q9JKD3 235 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 NbnQ9R207 751 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Mx2Q9WVP9 655 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Gpr179E9PY61 2293 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Jmjd1cQ69ZK6 2350 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 AcacbE9Q4Z2 2448 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Gm5485A0A1D5RM98 91 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Gm11939A2A592 99 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Gm12394A2AKP6 982 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Taf4bG5E8Z2 855 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Vmn2r15L7N2A0 855 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Man2b1O09159 1013 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Trappc3O55013 180 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Pde8aO88502 823 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 P01652 108 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cr2P19070 1025 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Irf8P23611 424 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Rasa2P58069 847 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 VegfcP97953 415 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Bcl2a1cQ0P538 128 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Ceacam5Q3UKK2 947 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Dlg4Q62108 724 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 RbfaQ6P3B9 350 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Nrde2Q80XC6 1172 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Tnpo1Q8BFY9 898 aaKnown RBP8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cdh7Q8BM92 785 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Defb22Q8BVC1 179 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Tmem87aQ8BXN9 555 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Hmgcll1Q8JZS7 343 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Pop1Q8K205 1045 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Dhcr24Q8VCH6 516 aaKnown RBP8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Olfr1499Q8VG65 314 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Mat1aQ91X83 396 aaKnown RBP8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Sdr42e1Q9D665 394 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cacna1dQ99246 2179 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Myo15aQ9QZZ4 3511 aa8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Map1bP14873 2464 aaKnown RBP8.55□□□□□ -1.04
Trim40-203ENSMUST00000172711 Il17dA0A0B4J1G4 205 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Igkv5-45A0A0B4J1J1 115 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Rabgap1lA6H6A9 815 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Pcsk6F6XJP7 959 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Gm8334F7CD45 553 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Colca2F8VPY8 239 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Slc32a1O35633 525 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Tpd52l1O54818 204 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Hsp90aa1P07901 733 aaKnown RBP8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Ctnnd1P30999 938 aaKnown RBP8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 HccsP53702 272 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cntn5P68500 1098 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Vps45P97390 570 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cry1P97784 606 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Gsdmc2Q2KHK6 480 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Nlrp4cQ3TKR3 982 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Gsdmc4Q3TR54 480 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Ppp4r3cQ3V0Y1 813 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 PfplQ5RKV8 702 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Atp13a4Q5XF90 1193 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 TCAIMQ66JZ4 499 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Snx19Q6P4T1 997 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Efcab14Q8BGQ6 484 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Noc4lQ8BHY2 516 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Znf787Q8BIF9 381 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Edem2Q8BJT9 577 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Elmo3Q8BYZ7 720 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 SowahcQ8C0J6 512 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Rapgef5Q8C0Q9 814 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Samd3Q8C4H2 520 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 MmaaQ8C7H1 415 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Gsdmc3Q8CB12 480 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Zmiz2Q8CIE2 920 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Ppp1r16aQ923M0 524 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 TrabdQ99JY4 376 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Trim12aQ99PQ1 284 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Gemin2Q9CQQ4 269 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Dph2Q9CR25 489 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Ribc1Q9D0B8 379 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Polr2dQ9D7M8 142 aaKnown RBP8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Rgs3Q9DC04 966 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 TnmdQ9EP64 317 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Tlr5Q9JLF7 859 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Tnni1Q9WUZ5 187 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Il18rapQ9Z2B1 614 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Sycp2lA0A0M3U1B0 842 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Mindy4b-psA0A1W2P7H6 457 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 TomtA1Y9I9 258 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cdc27A2A6Q5 825 aa8.54□□□□□ -1.04
Trim40-203ENSMUST00000172711 Rhox3cA2AWM0 215 aa8.54□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms