RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Siglec10Q80ZE3 688 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Atpaf1Q811I0 324 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ptbp3Q8BHD7 523 aaKnown RBP9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cops7bQ8BV13 264 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Strip1Q8C079 837 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Zfp991Q8R1N3 573 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Krt25Q8VCW2 446 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Riok1Q922Q2 567 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Sntg1Q925E1 517 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Themis3Q9CU24 569 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Coq5Q9CXI0 327 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 IkbipQ9DBZ1 373 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 CenpkQ9ESN5 271 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Vav3Q9R0C8 847 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Zfp111Q9R164 701 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cul1Q9WTX6 776 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ror2Q9Z138 944 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm45015A0A140LII9 184 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 MndalD0QMC3 538 aaKnown RBP9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm4312K9J7E2 289 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 TecP24604 630 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Adamts15P59384 950 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Usp46P62069 366 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 RalgdsQ03385 852 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 NpeppsQ11011 920 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Rnf113a2Q14B01 337 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Mmp25Q3U435 615 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 OtulinQ3UCV8 352 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tsr1Q5SWD9 803 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gas8Q60779 478 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Foxd3Q61060 465 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Pon2Q62086 354 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Zhx2Q8C0C0 836 aaKnown RBP9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Lca5lQ8C0X0 741 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Rtp1Q8C8C1 263 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Krt222Q8CCX5 294 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Q8CDN1 933 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Rbm28Q8CGC6 750 aaKnown RBP9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Bdh2Q8JZV9 245 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Taco1Q8K0Z7 294 aaKnown RBP9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Pcdhb18Q91Y02 792 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Sike1Q9CPR7 207 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Dennd6bQ9D9V7 585 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Xlr4bQ9JJQ7 215 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Atp6v0a1Q9Z1G4 839 aaKnown RBP9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 2210011C24RikA0A087WQ89 206 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tbc1d25A1A5B6 742 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Krt28A6BLY7 462 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Olfr1329L7MTV4 313 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Npc1O35604 1277 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Bcat1P24288 386 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Arf3P61205 181 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Nos3P70313 1202 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Arf1P84078 181 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Agap2Q3UHD9 1186 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Pcdh19Q80TF3 1145 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Sass6Q80UK7 654 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 PolbQ8K409 335 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Snx9Q91VH2 595 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 DeraQ91YP3 318 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Acy1Q99JW2 408 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ddah2Q99LD8 285 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Slc12a9Q99MR3 914 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gtf2ird2Q99NI3 936 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Fam32aQ9CR80 112 aaKnown RBP9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Thap12Q9CUX1 758 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Pin4Q9CWW6 131 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Rab11fip1Q9D620 645 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Eef1gQ9D8N0 437 aaKnown RBP9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Emc7Q9EP72 241 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ntn4Q9JI33 628 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Pdzd4Q9QY39 772 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 PodxlQ9R0M4 503 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Myo1cQ9WTI7 1063 aa9.5□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm21936A0A1Y7VJE9 144 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm5788A0A1Y7VK80 144 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Nup62clA2AG10 272 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Olfr750E9Q0Z1 331 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm5039J3QNT6 144 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm2035J3QP87 144 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tlk2O55047 718 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Me1P06801 572 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Hoxb1P17919 297 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Alppl2P24823 529 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 GuloP58710 440 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Kcnab2P62482 367 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm2016Q3TQZ4 144 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Kmt5bQ3U8K7 883 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm8332Q3UTA4 144 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Spire1Q52KF3 598 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Btf3Q64152 204 aaKnown RBP9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 CapslQ6P8Y1 208 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cmtr2Q8BWQ4 767 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm5662Q8BX20 144 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 C130026I21RikQ8C898 291 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Acad10Q8K370 1069 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ccdc80Q8R2G6 949 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Pcdhb21Q91V48 774 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Mat2bQ99LB6 334 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tdrd1Q99MV1 1172 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms