RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 IdeQ9JHR7 1019 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Scamp5Q9JKD3 235 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm5485A0A1D5RM98 91 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ttc13A0A1L1SSC7 844 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 1700001O22RikA2APZ1 375 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm11239E9Q5Z9 360 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm11237F2Z3W5 360 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm11238F2Z478 360 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Btg3P50615 252 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cdr2P97817 455 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm428Q3UTE2 360 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Nfe2l2Q60795 597 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ncoa7Q6DFV7 943 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cacna2d2Q6PHS9 1154 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Tlr13Q6R5N8 991 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Olfr1105Q7TR58 312 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Heatr3Q8BQM4 679 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rsl1d1Q8BVY0 452 aaKnown RBP7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Robo4Q8C310 1012 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Fermt3Q8K1B8 665 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Acsf2Q8VCW8 615 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 B4galt3Q91YY2 395 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Mrps2Q924T2 291 aaKnown RBP7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Med7Q9CZB6 233 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ttc33Q9D6K7 262 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 DmgdhQ9DBT9 869 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rfc2Q9WUK4 349 aaKnown RBP7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rasgrp1Q9Z1S3 795 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ms4a14A0A087WSD2 1232 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 C6E9Q6D8 931 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Olfr1022L7MTT3 315 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Mkl2P59759 1080 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Runx2Q08775 607 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Fam47cQ14BE7 430 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Upf3aQ3ULJ3 422 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Abi3bpQ59IW6 1179 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 E2f7Q6S7F2 904 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 B3glctQ8BHT6 489 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Slfn5Q8CBA2 884 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Appl1Q8K3H0 707 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ctage5Q8R311 779 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Lmcd1Q8VEE1 365 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Olfr356Q8VFP5 315 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Prb1Q91X93 504 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Apopt1Q9CQW7 192 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Dlgap1Q9D415 992 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cep83Q9D5R3 692 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Tmem86aQ9D8N3 241 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Col4a3Q9QZS0 1669 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Maml3D4QGC2 1135 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm10721J3QPJ9 223 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 ByslO54825 436 aaKnown RBP7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cyp8b1O88962 500 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Hoxc8P09025 242 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Kif5aP33175 1027 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 IvlP48997 467 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rpl10aP53026 217 aaKnown RBP7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gjb6P70689 261 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Grm2Q14BI2 872 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Tmc5Q32NZ6 967 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Aarsd1Q3THG9 412 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ppp4r3cQ3V0Y1 813 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Spa17Q62252 149 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Q6PAC4 1279 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 PdgfrlQ6PE55 375 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Epc1Q8C9X6 813 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Tbc1d14Q8CGA2 694 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Tph2Q8CGV2 488 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Fam151aQ8QZW3 608 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Znf830Q8R1N0 363 aaKnown RBP7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Uroc1Q8VC12 676 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Snrnp25Q8VIK1 123 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Srgap2Q91Z67 1071 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 ArskQ9D2L1 553 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cyth1Q9QX11 398 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Pcsk1nQ9QXV0 258 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Scn5aQ9JJV9 2019 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Piezo2Q8CD54 2822 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Prr22F6TNE3 422 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Mroh9G5E8L9 891 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Kifc3O35231 824 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 DffaO54786 331 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Oaz1P54369 227 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Mapre1Q61166 268 aaKnown RBP7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ctnna2Q61301 953 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Slc20a1Q61609 681 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Adam6bQ6IMH7 756 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gpr180Q8BPS4 441 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 CgasQ8C6L5 507 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cplx3Q8R1B5 158 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Thap12Q9CUX1 758 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Dph5Q9CWQ0 281 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 CtsfQ9R013 462 aa7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Mki67E9PVX6 3177 aaKnown RBP7.22□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Lrrc63A6H694 637 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Foxm1O08696 760 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rrm1P07742 792 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Msh3P13705 1091 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Zbtb16Q3UQ17 673 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Lrig2Q52KR2 1054 aa7.21□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 64.1 ms