RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Pcdha2Q91Y17 948 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 BrdtQ91Y44 956 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Ophn1Q99J31 802 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 LipaQ9Z0M5 397 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Ttc30a2A2AKQ8 664 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Adamts6D3Z1A5 1117 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 ZfxP17012 799 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 PolgP54099 1218 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Atp5bP56480 529 aaKnown RBP15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 VegfaQ00731 214 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Chrna5Q2MKA5 467 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Gm29609Q3UU56 907 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Cyp2c29Q64458 490 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Rbl2Q64700 1135 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Tbc1d22bQ80VE5 505 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Usp6nlQ80XC3 819 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Gtf3c2Q8BL74 907 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Ccdc159Q8C963 411 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Epn3Q91W69 636 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Gbp7Q91Z40 638 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Grk2Q99MK8 689 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Smok3cA0A087WSF2 504 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Tnfrsf14A0A1W2P7D5 276 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Gm4846B2RWH8 538 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Gm3415J3QMS8 315 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Bmpr2O35607 1038 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 DffaO54786 331 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Lrrc74bQ14BP6 391 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Stx3Q64704 289 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Rad54bQ6PFE3 886 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Scaf4Q6PFF0 1209 aaKnown RBP15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Fam181bQ80VF6 417 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Nipa1Q8BHK1 323 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Fbxo28Q8BIG4 368 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Washc5Q8C2E7 1159 aaKnown RBP15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Sorcs3Q8VI51 1219 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Hdhd5Q91WM2 419 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Slc39a3Q99K24 317 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Nmd3Q99L48 503 aaKnown RBP15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Ddx56Q9D0R4 546 aaKnown RBP15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Pramef17A2ASJ1 475 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Cyp2t4E9PWV0 503 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 PrkcdP28867 674 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 S100bP50114 92 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 SnnP61807 88 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Fads6Q80UG1 342 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Trim14Q8BVW3 440 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Dppa3Q8QZY3 150 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 ChiaQ91XA9 473 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Pdia5Q921X9 517 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Kdelr1Q99JH8 212 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Ecrg4Q99LS0 148 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Ppp1r12aQ9DBR7 1029 aaKnown RBP15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Nr1h3Q9Z0Y9 445 aa15.38■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Ankfn1A0A140LIW7 1083 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Ssxb9A2BI93 185 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Tarbp2P97473 365 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Gm1604bQ3TRG0 118 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Tpp2Q64514 1262 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Adamtsl1Q8BLI0 1745 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Dcun1d2Q8BZJ7 259 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Nlrp4bQ8C6J9 863 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Olfr615Q8VGY4 313 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Necab2Q91ZP9 389 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Tcaf2Q921K8 919 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Polr3cQ9D483 533 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Tmbim4Q9DA39 238 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Cst12Q9DAN8 128 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Poc5Q9DBS8 558 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Dkc1Q9ESX5 509 aaKnown RBP15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Pcsk1nQ9QXV0 258 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Trpc2Q9R244 1172 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Sucla2Q9Z2I9 463 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Top3bQ9Z321 862 aaKnown RBP15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 NynrinQ5DTZ0 1840 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Mup10A2BIN1 180 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Mup14A2CEK7 180 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Mup19A9C497 187 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Mup15A9R9W0 180 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Mup17B5X0G2 180 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Gm28043E0CXC2 719 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Mup8E9PVW0 235 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 1700024B05RikE9Q6D7 167 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Mup7E9QA79 235 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Ptar1E9QAB6 424 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 P01734 135 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Mup6P02762 180 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Mup1P11588 180 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Mup2P11589 180 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Dynlt1P51807 113 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Tfdp1Q08639 410 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Elf3Q3UPW2 391 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Prr7Q3V0I2 269 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Large2Q5XPT3 690 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Rab34Q64008 259 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Rexo4Q6PAQ4 432 aaKnown RBP15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Gpr151Q7TSN6 422 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Kbtbd13Q8C828 458 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Zdhhc7Q91WU6 308 aa15.37■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 FtcdQ91XD4 541 aa15.37■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms