RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rbbp7Q60973 425 aaKnown RBP10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Xlr3cQ61806 226 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Npdc1Q64322 332 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Klra3Q64329 266 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Scaf8Q6DID3 1268 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Krt73Q6NXH9 539 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Dennd2cQ6P9P8 914 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Kcnt1Q6ZPR4 1224 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Znf507Q6ZPY5 941 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tigd4Q8BUZ3 513 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Il33Q8BVZ5 266 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Kank2Q8BX02 843 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Pcdhb7Q8CDY9 829 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rpp40Q8R1F9 363 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Cyp2c50Q91X77 490 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Med21Q9CQ39 144 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mrpl57Q9CQF8 102 aaKnown RBP10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tmem39aQ9CYC3 486 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 PfkpQ9WUA3 784 aaKnown RBP10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Phka1P18826 1241 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Pde6bP23440 856 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 SelpQ01102 768 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Acsbg2Q2XU92 667 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 HexdcQ3U4H6 486 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Klhdc9Q3USL1 350 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Olfr8Q60892 310 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Nab1Q61122 486 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Krt75Q8BGZ7 551 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Vmn1r214Q8R279 367 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Vmn1r64Q8R2B8 320 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Lrrc57Q9D1G5 239 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Maged2Q9ER67 616 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 PygmQ9WUB3 842 aaKnown RBP10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Gm8879F6R3J9 157 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mroh4G3X8W1 983 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Il27raO70394 623 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 GfapP03995 430 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 PtpraP18052 829 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Afg1lQ3V384 480 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Gpr151Q7TSN6 422 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rnf168Q80XJ2 565 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Q8BP99 230 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Zfp398Q8BV16 643 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Leg1Q8C6C9 337 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Zdhhc3Q8R173 299 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rhobtb2Q91V93 728 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Polr3hQ9D2C6 204 aaKnown RBP10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 AllcQ9JHX6 414 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Cdr2lA2A6T1 465 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Myo1dQ5SYD0 1006 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Als2clQ60I26 952 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Pcsk9Q80W65 694 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Zmym6Q8BS54 1249 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mamdc2Q8CG85 686 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tesk2Q8VCT9 570 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Oas1dQ8VI95 361 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Lpin2Q99PI5 893 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mxra8Q9DBV4 442 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 SerhlQ9EPB5 311 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Actl7aQ9QY84 440 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rhox3cA2AWM0 215 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rhox3hL7MU37 215 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 AoahO35298 574 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Folh1O35409 752 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 OsbpQ3B7Z2 805 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Patl1Q3TC46 770 aaKnown RBP10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Parp3Q3ULW8 533 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 FaxcQ3UMF9 409 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rhox3aQ4TU90 215 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ugt1a9Q62452 528 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rbl2Q64700 1135 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tdpoz3Q717B4 365 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Adi1Q99JT9 179 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 MydgfQ9CPT4 166 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 XpotQ9CRT8 963 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slfn2Q9Z0I6 378 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Chek2Q9Z265 546 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Srp72F8VQC1 671 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rrm1P07742 792 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 RarbP22605 482 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Smcr8Q3UMB5 935 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tp53i13Q5F267 385 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Brip1Q5SXJ3 1174 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 PostnQ62009 838 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Fastkd1Q6DI86 829 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 PoliQ6R3M4 717 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Fam107aQ78TU8 144 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Appl1Q8K3H0 707 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Gtse1Q8R080 741 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Znf426Q8R1D1 550 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Olfr615Q8VGY4 313 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Pcdha5Q91Y15 934 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mettl16Q9CQG2 553 aaKnown RBP10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Oxct1Q9D0K2 520 aaKnown RBP10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Dlgap1Q9D415 992 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Cul2Q9D4H8 745 aa10.67□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rap1gapA2ALS5 663 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Krt28A6BLY7 462 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Nccrp1G3X9C2 266 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Irf3P70671 419 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms