RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Cdo1P60334 200 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Usp46P62069 366 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gtf2bP62915 316 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Micall2Q3TN34 1009 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Fam172aQ3TNH5 417 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 P3h1Q3V1T4 739 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Grm6Q5NCH9 871 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Stxbp2Q64324 593 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Suds3Q8BR65 328 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Taf5Q8C092 801 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 CopaQ8CIE6 1224 aaKnown RBP11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Fcho1Q8K285 873 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gmcl1Q920G9 524 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ubiad1Q9DC60 336 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Tjp1P39447 1745 aaKnown RBP11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gon4lQ9DB00 2260 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Birc5O70201 140 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 DesP31001 469 aaKnown RBP11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Fermt1P59113 677 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Atp9bP98195 1146 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gas1Q01721 343 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Nxpe4Q52KP5 543 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Lrrc24Q8BHA1 521 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Dupd1Q8BK84 215 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Tmem161bQ8C2L6 487 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Tmem132cQ8CEF9 1099 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Lrit1Q8K099 624 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Micu3Q9CTY5 523 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 PrccQ9EQC8 491 aaKnown RBP11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 C1qtnf1Q9QXP7 281 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Chek2Q9Z265 546 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Vmn2r25W4VSP2 855 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 CblP22682 913 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 PdgfraP26618 1089 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 XiapQ60989 496 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Tm4sf1Q64302 202 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gbp5Q8CFB4 590 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 ClyblQ8R4N0 338 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mageb3Q9D2H4 330 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Anxa9Q9JHQ0 345 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Dmap1Q9JI44 468 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Nrf1Q9WU00 503 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Coro1cQ9WUM4 474 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Nav1Q8CH77 1875 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ptar1E9QAB6 424 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 OmdO35103 423 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Vti1aO89116 217 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Serpinh1P19324 417 aaKnown RBP11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Nos2P29477 1144 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Kcnc2Q14B80 642 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Magea3Q6T340 320 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Sgsm3Q8VCZ6 750 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Slc25a3Q8VEM8 357 aaKnown RBP11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ier5lQ99J55 406 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Pih1d1Q9CQJ2 290 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Chit1Q9D7Q1 464 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Smchd1Q6P5D8 2007 aaKnown RBP11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Prdm11A2AGX3 565 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Vav1P27870 845 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Pold1P52431 1105 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 MyrfQ3UR85 1138 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Slc26a2Q62273 739 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Arhgap20Q6IFT4 1182 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Msantd2Q6NZR2 559 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Tcaf1Q8BNE1 924 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Drc3Q9D5E4 523 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Spata1Q9D5R4 444 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 MrrfQ9D6S7 262 aaKnown RBP11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Rmdn1Q9DCV4 305 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Copg2Q9QXK3 871 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Tagln3Q9R1Q8 199 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 2210011C24RikA0A087WQ89 206 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Plekhg4A0A1L1SU27 1217 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Adcy1O88444 1118 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 1810049J17RikQ3V2G9 153 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Fam160a1Q505K2 1081 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Itm2aQ61500 263 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Cops7bQ8BV13 264 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 TgdsQ8VDR7 355 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Fam49bQ921M7 324 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 KlbQ99N32 1043 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Krt16Q9Z2K1 469 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ccdc144bE9PVZ3 520 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Prl3b1P09586 222 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 TdgP56581 421 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Eps8Q08509 821 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Homer2Q9QWW1 354 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Rbck1Q9WUB0 508 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Kifc5bE9PUA5 672 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Stmn1P54227 149 aaKnown RBP11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 PrcpQ7TMR0 491 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Fam185aQ7TPD2 378 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Osbpl2Q8BX94 484 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Adprhl2Q8CG72 370 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Cnot6Q8K3P5 557 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Irak3Q8K4B2 609 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Borcs5Q9D920 195 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Dbn1Q9QXS6 706 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Spag17Q5S003 2320 aa11.74□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Pcna-ps2A0A140T8V5 261 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms