RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Lrrc14bQ3UJB3 510 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Adamts18Q4VC17 1219 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Gm4952Q5FW57 296 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 PterQ60866 349 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Slain1Q68FF7 579 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 OcrlQ6NVF0 900 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 PimregQ8BFY7 231 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Spata21Q8BHW6 681 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Il33Q8BVZ5 266 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Trmt13Q8BYH3 481 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 NemfQ8CCP0 1064 aaKnown RBP11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Tekt2Q922G7 430 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Slc25a11Q9CR62 314 aaKnown RBP11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Taf7lQ9D3R9 471 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Psmg1Q9JK23 289 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Ccr10Q9JL21 362 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Ppp1r36D3Z0R2 411 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Gm3371F7CQW8 167 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Nek2O35942 443 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Gsta4P24472 222 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Vav1P27870 845 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Gjb3P28231 270 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 LeprP48356 1162 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 YwhagP61982 247 aaKnown RBP11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Rpl22P67984 128 aaKnown RBP11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mylk3Q3UIZ8 795 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 P3h1Q3V1T4 739 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Tmem65Q4VAE3 234 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Pik3r5Q5SW28 871 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Hsph1Q61699 858 aaKnown RBP11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Sez6lQ6P1D5 963 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Spata24Q6P926 205 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Fam102aQ78T81 392 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Map1sQ8C052 973 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Olfr385Q8VGT1 312 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Epn3Q91W69 636 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Zfp617Q91WM0 559 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Cdk9Q99J95 372 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 GatbQ99JT1 557 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Gps1Q99LD4 471 aaKnown RBP11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Abcg8Q9DBM0 673 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 ParvaQ9EPC1 372 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Xpo7Q9EPK7 1087 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Sfmbt1Q9JMD1 863 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Rnf25Q9QZR0 456 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Zgrf1Q0VGT4 1863 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Lama3Q61789 3330 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 1700031M16RikA0A087WSH0 82 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 PtproE9Q612 1226 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Ces1cP23953 554 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Pdcd2P46718 343 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Gm3414Q3TNU4 584 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Ddr2Q62371 854 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Klhl17Q6TDP3 640 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Dupd1Q8BK84 215 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Sh2d5Q8JZW5 429 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Glis2Q8VDL9 521 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Smap1Q91VZ6 440 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mrps5Q99N87 432 aaKnown RBP11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mms19Q9D071 1031 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Gucy1a3Q9ERL9 691 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 HemgnQ9ERZ0 503 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 AuhQ9JLZ3 314 aa11.12□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Gm27029A2A4P4 543 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mup10A2BIN1 180 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mup14A2CEK7 180 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mup19A9C497 187 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mup15A9R9W0 180 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mup17B5X0G2 180 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mup8E9PVW0 235 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mup7E9QA79 235 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Dync1i2O88487 612 aaKnown RBP11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mup6P02762 180 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mup1P11588 180 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mup2P11589 180 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Tnnc2P20801 160 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Eif3eP60229 445 aaKnown RBP11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Nt5dc3Q3UHB1 546 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 GcgrQ61606 485 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Xlr3cQ61806 226 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Spa17Q62252 149 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Trpm4Q7TN37 1213 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 MogsQ80UM7 834 aaKnown RBP11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Pak4Q8BTW9 593 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Kat14Q8CID0 779 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Nek8Q91ZR4 698 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Zdhhc13Q9CWU2 622 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Setd6Q9CWY3 473 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Pgm1Q9D0F9 562 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 PrccQ9EQC8 491 aaKnown RBP11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Il21rQ9JHX3 529 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Cyp39a1Q9JKJ9 470 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 IqccA2ADZ8 418 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Zfp990B1AVN5 605 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Hoxc6P10629 235 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Cav1P49817 178 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 SftpdP50404 374 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Ect2Q07139 913 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Znf112Q0VAW7 879 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Slc17a7Q3TXX4 560 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms