RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Scgb2b21A0A087WQA9 112 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Zfp990B1AVN5 605 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Wdr95D3Z7A8 784 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Cyp2b9P12790 491 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Glud1P26443 558 aaKnown RBP9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Gad2P48320 585 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Rpl10aP53026 217 aaKnown RBP9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Samhd1Q60710 627 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Zic5Q7TQ40 622 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Pcmtd2Q8BHD8 359 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Colgalt1Q8K297 617 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Ppp4r1Q8K2V1 951 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Polr3hQ9D2C6 204 aaKnown RBP9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Oma1Q9D8H7 521 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Lrrc34Q9DAM1 415 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Dpp7Q9ET22 506 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Ror1Q9Z139 937 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Xbp1O35426 267 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Sptlc1O35704 473 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Magea8O89012 320 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 NrlP54846 237 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Fam8a1Q3URQ4 399 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Trappc3lQ4KL14 181 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Abi3bpQ59IW6 1179 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Magea3Q6T340 320 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Lsm8Q6ZWM4 96 aaKnown RBP9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Spata20Q80YT5 790 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Ccser1Q8C0C4 895 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Armcx6Q8K3A6 301 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Wdr98Q8VC42 657 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 IrgqQ8VIM9 583 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Msi2Q920Q6 346 aaKnown RBP9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Stk33Q924X7 491 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Bzw1Q9CQC6 419 aaKnown RBP9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Scyl3Q9DBQ7 735 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Atp13a1Q9EPE9 1200 aaKnown RBP9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 PnkpQ9JLV6 522 aaKnown RBP9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Atp11cQ9QZW0 1129 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mta2Q9R190 668 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Trpv2Q9WTR1 756 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Ttc7bE9Q6P5 843 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Vmn2r39L7N2E5 861 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Dusp8O09112 663 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Timm44O35857 452 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Soat2O88908 525 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Il2P04351 169 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Il2rbP16297 539 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mcpt4P21812 246 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Lta4hP24527 611 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Serping1P97290 504 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Serpina1eQ00898 413 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 HdxQ14B70 692 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Nat8lQ3UGX3 299 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Tars2Q3UQ84 723 aaKnown RBP9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Foxred2Q3USW5 665 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Syce2Q505B8 171 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Trim38Q5SZ99 471 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Jade1Q6ZPI0 834 aaKnown RBP9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Vgll2Q8BGW8 322 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 B3glctQ8BHT6 489 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Adprhl2Q8CG72 370 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Rmnd1Q8CI78 450 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Catsper1Q91ZR5 686 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Cpt1bQ924X2 772 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Nuf2Q99P69 463 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Lpin3Q99PI4 848 aa9.84□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mroh7A2AVR2 1279 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Olfr1354E9Q5G9 310 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Impa1O55023 277 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Gpc4P51655 557 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Gcnt3Q5JCT0 437 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 LbpQ61805 481 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Capn11Q6J756 714 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Btbd10Q80X66 475 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Thnsl1Q8BH55 747 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Dupd1Q8BK84 215 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Bri3bpQ8BXV2 253 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Taf5Q8C092 801 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Q99KU6 348 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 MceeQ9D1I5 178 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Tmx2Q9D710 295 aaKnown RBP9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Map3k20Q9ESL4 802 aaKnown RBP9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Neu2Q9JMH3 379 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 B4galt5Q9JMK0 388 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Msh5Q9QUM7 833 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 A630010A05RikA9C473 232 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Olfr67F8VPJ8 320 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Prl3b1P09586 222 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 CblP22682 913 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Gucy2eP52785 1108 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Samd11Q1RNF8 542 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Baiap2l2Q80Y61 522 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 EmsyQ8BMB0 1264 aaKnown RBP9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Mamdc2Q8CG85 686 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 OlahQ8R197 265 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Ccdc92Q8VDN4 314 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Taf11Q99JX1 211 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Wars2Q9CYK1 360 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Tmem59Q9QY73 323 aa9.83□□□□□ -0.84
Col6a1-201ENSMUST00000001147 Skint3A7TZF0 458 aa9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms