RNA–Protein interactions for RNA: YPL194W

DDC1, Transcript of DNA damage checkpoint protein, yeast

Gene DDC1, Length 1,839 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DDC1	YPL194W	YLR422W	Q06409	1932 aa		4.13	□□□□□ -1.75
DDC1	YPL194W	BCK1	Q01389	1478 aa		4.13	□□□□□ -1.75
DDC1	YPL194W	YJL027C	P47063	138 aa	Predicted RBP	4.13	□□□□□ -1.75
DDC1	YPL194W	MRPS16	Q02608	121 aa		4.13	□□□□□ -1.75
DDC1	YPL194W	MLP1	Q02455	1875 aa	Known RBP	4.13	□□□□□ -1.75
DDC1	YPL194W	RPL33B	P41056	107 aa	Known RBP	4.12	□□□□□ -1.75
DDC1	YPL194W	GCV3	P39726	170 aa	Predicted RBP	4.11	□□□□□ -1.75
DDC1	YPL194W	SWM2	P40342	146 aa		4.11	□□□□□ -1.75
DDC1	YPL194W	YPR153W	Q06537	140 aa		4.11	□□□□□ -1.75
DDC1	YPL194W	TMC1	Q08422	150 aa	Predicted RBP	4.11	□□□□□ -1.75
DDC1	YPL194W	RPS25A	Q3E792	108 aa	Predicted RBP	4.11	□□□□□ -1.75
DDC1	YPL194W	YFL051C	P43552	160 aa		4.11	□□□□□ -1.75
DDC1	YPL194W	BOL2	P53082	120 aa		4.11	□□□□□ -1.75
DDC1	YPL194W	YOL131W	Q08270	108 aa		4.11	□□□□□ -1.75
DDC1	YPL194W	PCC1	Q3E833	88 aa		4.11	□□□□□ -1.75
DDC1	YPL194W	ATG8	P38182	117 aa	RIP-Chip data	4.1	□□□□□ -1.75	not detected
DDC1	YPL194W	YIL014C-A	Q02598	104 aa		4.1	□□□□□ -1.75
DDC1	YPL194W	ICY1	Q04329	127 aa		4.1	□□□□□ -1.75
DDC1	YPL194W	YPR195C	Q06594	109 aa		4.1	□□□□□ -1.75
DDC1	YPL194W	PAU16	P35994	123 aa		4.09	□□□□□ -1.75
DDC1	YPL194W	RSM18	P40033	138 aa		4.09	□□□□□ -1.75
DDC1	YPL194W	PAU15	P40585	124 aa		4.09	□□□□□ -1.75
DDC1	YPL194W	FAS2	P19097	1887 aa	Known RBP	4.09	□□□□□ -1.75
DDC1	YPL194W	TOM6	P33448	61 aa		4.09	□□□□□ -1.76
DDC1	YPL194W	KRE9	P39005	276 aa		4.08	□□□□□ -1.76
DDC1	YPL194W	YIR020C	P40575	100 aa		4.08	□□□□□ -1.76
DDC1	YPL194W	POP3	P53833	195 aa	Predicted RBP	4.08	□□□□□ -1.76
DDC1	YPL194W	YDR119W-A	Q2V2P9	66 aa		4.08	□□□□□ -1.76
DDC1	YPL194W	RTC6	O14464	93 aa		4.07	□□□□□ -1.76
DDC1	YPL194W	MRPS9	P38120	278 aa		4.07	□□□□□ -1.76
DDC1	YPL194W	YHL005C	P38752	130 aa		4.07	□□□□□ -1.76
DDC1	YPL194W	YFL012W	P43580	148 aa		4.07	□□□□□ -1.76
DDC1	YPL194W	CUE4	Q04201	117 aa	Predicted RBP	4.07	□□□□□ -1.76
DDC1	YPL194W	YDL157C	Q12082	118 aa		4.07	□□□□□ -1.76
DDC1	YPL194W	SNF2	P22082	1703 aa		4.07	□□□□□ -1.76
DDC1	YPL194W	UTH1	P36135	365 aa		4.07	□□□□□ -1.76
DDC1	YPL194W	YPI1	P43587	155 aa		4.07	□□□□□ -1.76
DDC1	YPL194W	DAD4	P69851	72 aa		4.07	□□□□□ -1.76
DDC1	YPL194W	RGM1	Q00453	211 aa		4.07	□□□□□ -1.76
DDC1	YPL194W	FKS1	P38631	1876 aa	Known RBP	4.06	□□□□□ -1.76
DDC1	YPL194W	SOD1	P00445	154 aa	Known RBP	4.06	□□□□□ -1.76
DDC1	YPL194W	YBR209W	P38311	105 aa		4.06	□□□□□ -1.76
DDC1	YPL194W	ATX1	P38636	73 aa		4.06	□□□□□ -1.76
DDC1	YPL194W	CIS3	P47001	227 aa		4.06	□□□□□ -1.76
DDC1	YPL194W	ICS3	P47034	131 aa		4.06	□□□□□ -1.76
DDC1	YPL194W	CMC4	Q3E7A9	73 aa		4.06	□□□□□ -1.76
DDC1	YPL194W	RPS19A	P07280	144 aa	Known RBP	4.05	□□□□□ -1.76
DDC1	YPL194W	RPS19B	P07281	144 aa	Predicted RBP	4.05	□□□□□ -1.76
DDC1	YPL194W	PAU5	P43575	122 aa		4.05	□□□□□ -1.76
DDC1	YPL194W	YLR194C	Q05777	254 aa		4.05	□□□□□ -1.76
DDC1	YPL194W	COX8	P04039	78 aa		4.05	□□□□□ -1.76
DDC1	YPL194W	SEC11	P15367	167 aa		4.05	□□□□□ -1.76
DDC1	YPL194W	AVO2	Q04749	426 aa		4.05	□□□□□ -1.76
DDC1	YPL194W	LAA1	P39526	2014 aa		4.04	□□□□□ -1.76
DDC1	YPL194W	RPB7	P34087	171 aa		4.04	□□□□□ -1.76
DDC1	YPL194W	COX23	P38824	151 aa		4.04	□□□□□ -1.76
DDC1	YPL194W	MET31	Q03081	177 aa		4.04	□□□□□ -1.76
DDC1	YPL194W	YJL197C-A	P0C5P0	93 aa		4.03	□□□□□ -1.76
DDC1	YPL194W	SRX1	P36077	127 aa		4.03	□□□□□ -1.76
DDC1	YPL194W	IMP2	P46972	177 aa		4.03	□□□□□ -1.76
DDC1	YPL194W	RPL36B	O14455	100 aa	Known RBP	4.02	□□□□□ -1.77
DDC1	YPL194W	RPL36A	P05745	100 aa	Predicted RBP	4.02	□□□□□ -1.77
DDC1	YPL194W	VPS68	Q12016	184 aa		4.02	□□□□□ -1.77
DDC1	YPL194W	RPL22A	P05749	121 aa	Known RBP	4.02	□□□□□ -1.77
DDC1	YPL194W	UTR5	P32630	166 aa		4.02	□□□□□ -1.77
DDC1	YPL194W	FIT2	Q08906	153 aa		4.02	□□□□□ -1.77
DDC1	YPL194W	YNL162W-A	Q3E7A8	72 aa		4.02	□□□□□ -1.77
DDC1	YPL194W	YIL134C-A	Q45U18	67 aa		4.02	□□□□□ -1.77
DDC1	YPL194W	FAS1	P07149	2051 aa	Known RBP	4.01	□□□□□ -1.77
DDC1	YPL194W	HSP150	P32478	413 aa		4.01	□□□□□ -1.77
DDC1	YPL194W	YEL014C	P39999	101 aa		4.01	□□□□□ -1.77
DDC1	YPL194W	DNF3	Q12674	1656 aa		4.01	□□□□□ -1.77
DDC1	YPL194W	RPS22A	P0C0W1	130 aa	Known RBP	4	□□□□□ -1.77
DDC1	YPL194W	YBR292C	P38357	123 aa		4	□□□□□ -1.77
DDC1	YPL194W	PAU23	Q07987	124 aa		4	□□□□□ -1.77
DDC1	YPL194W	PAU17	Q12370	124 aa		4	□□□□□ -1.77
DDC1	YPL194W	YPR145C-A	Q2V2P0	78 aa		4	□□□□□ -1.77
DDC1	YPL194W	YMR030W-A	Q3E760	96 aa		4	□□□□□ -1.77
DDC1	YPL194W	GSC2	P40989	1895 aa		4	□□□□□ -1.77
DDC1	YPL194W	MYO1	P08964	1928 aa		4	□□□□□ -1.77
DDC1	YPL194W	FPR1	P20081	114 aa	Known RBP	4	□□□□□ -1.77
DDC1	YPL194W	MIC27	P50945	234 aa		4	□□□□□ -1.77
DDC1	YPL194W	ROX3	P25046	220 aa		3.99	□□□□□ -1.77
DDC1	YPL194W	HPA2	Q06592	156 aa		3.99	□□□□□ -1.77
DDC1	YPL194W	RPL26A	P05743	127 aa	Known RBP	3.98	□□□□□ -1.77
DDC1	YPL194W	QCR8	P08525	94 aa		3.98	□□□□□ -1.77
DDC1	YPL194W	YHR022C	P38763	256 aa		3.98	□□□□□ -1.77
DDC1	YPL194W	YDR381C-A	Q3E6R5	114 aa		3.98	□□□□□ -1.77
DDC1	YPL194W	MHF2	Q3E829	80 aa		3.98	□□□□□ -1.77
DDC1	YPL194W	YNR034W-A	Q3E841	98 aa		3.98	□□□□□ -1.77
DDC1	YPL194W	NHP2	P32495	156 aa	Predicted RBP	3.98	□□□□□ -1.77
DDC1	YPL194W	YNL198C	P40166	100 aa		3.98	□□□□□ -1.77
DDC1	YPL194W	RPL26B	P53221	127 aa	Known RBP	3.98	□□□□□ -1.77
DDC1	YPL194W	USO1	P25386	1790 aa		3.97	□□□□□ -1.77
DDC1	YPL194W	YER084W	P40057	128 aa		3.97	□□□□□ -1.77
DDC1	YPL194W	YOL118C	Q08259	102 aa		3.97	□□□□□ -1.77
DDC1	YPL194W	HMRA2	P0CY13	119 aa		3.96	□□□□□ -1.78
DDC1	YPL194W	LST8	P41318	303 aa		3.96	□□□□□ -1.78
DDC1	YPL194W	RPS22B	Q3E7Y3	130 aa	Known RBP	3.95	□□□□□ -1.78
DDC1	YPL194W	CYT2	Q00873	224 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms