RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C ADH2P00331 348 aaKnown RBP4.16□□□□□ -1.74
UBC11YOR339C RPL27BP0C2H7 136 aaKnown RBP4.16□□□□□ -1.74
UBC11YOR339C MRP49P32388 137 aa4.16□□□□□ -1.74
UBC11YOR339C PAU16P35994 123 aa4.16□□□□□ -1.74
UBC11YOR339C AIM29P36154 155 aa4.16□□□□□ -1.74
UBC11YOR339C YIL059CP40520 121 aa4.16□□□□□ -1.74
UBC11YOR339C PKR1Q03880 122 aaKnown RBP4.16□□□□□ -1.74
UBC11YOR339C YLR112WQ12130 139 aa4.16□□□□□ -1.74
UBC11YOR339C YMR122W-AQ3E842 84 aa4.16□□□□□ -1.74
UBC11YOR339C COA6Q3E846 104 aa4.16□□□□□ -1.74
UBC11YOR339C TRP1P00912 224 aa4.15□□□□□ -1.75
UBC11YOR339C FYV4P38783 130 aaPredicted RBP4.15□□□□□ -1.75
UBC11YOR339C URM1P40554 99 aaPredicted RBP4.15□□□□□ -1.75
UBC11YOR339C SPC1P46965 94 aa4.15□□□□□ -1.75
UBC11YOR339C ERI1P62651 68 aaKnown RBP4.15□□□□□ -1.75
UBC11YOR339C COA3Q3E7B2 85 aa4.15□□□□□ -1.75
UBC11YOR339C YMR103CQ04436 120 aa4.14□□□□□ -1.75
UBC11YOR339C TPT1Q12272 230 aaKnown RBP4.14□□□□□ -1.75
UBC11YOR339C RPL33AP05744 107 aaKnown RBP4.13□□□□□ -1.75
UBC11YOR339C APS1P35181 156 aa4.13□□□□□ -1.75
UBC11YOR339C YEL008WP40001 126 aa4.13□□□□□ -1.75
UBC11YOR339C YER085CP40058 173 aa4.13□□□□□ -1.75
UBC11YOR339C RPL33BP41056 107 aaKnown RBP4.13□□□□□ -1.75
UBC11YOR339C PBA1Q05778 276 aa4.13□□□□□ -1.75
UBC11YOR339C CNL1Q06333 122 aa4.13□□□□□ -1.75
UBC11YOR339C SCS22Q6Q595 175 aa4.13□□□□□ -1.75
UBC11YOR339C YLL066W-BQ8TGJ7 56 aa4.13□□□□□ -1.75
UBC11YOR339C RPL31AP0C2H8 113 aaKnown RBP4.12□□□□□ -1.75
UBC11YOR339C YMR320WQ04897 101 aa4.12□□□□□ -1.75
UBC11YOR339C YCL021W-AQ96VH3 125 aa4.12□□□□□ -1.75
UBC11YOR339C DIF1O13577 133 aa4.11□□□□□ -1.75
UBC11YOR339C SEC11P15367 167 aa4.11□□□□□ -1.75
UBC11YOR339C ATP15P21306 62 aa4.11□□□□□ -1.75
UBC11YOR339C YKL070WP36087 169 aa4.11□□□□□ -1.75
UBC11YOR339C HAC1P41546 238 aa4.11□□□□□ -1.75
UBC11YOR339C YLR050CQ12155 161 aaKnown RBP4.11□□□□□ -1.75
UBC11YOR339C RTC6O14464 93 aa4.1□□□□□ -1.75
UBC11YOR339C SVP26P38869 228 aa4.1□□□□□ -1.75
UBC11YOR339C ERG28P40030 148 aa4.1□□□□□ -1.75
UBC11YOR339C RRT15Q3E811 62 aa4.1□□□□□ -1.75
UBC11YOR339C YPR010C-AA5Z2X5 72 aa4.09□□□□□ -1.75
UBC11YOR339C FUN14P18411 198 aa4.09□□□□□ -1.75
UBC11YOR339C YBR219CP38317 127 aa4.09□□□□□ -1.75
UBC11YOR339C YGL230CP53074 147 aa4.09□□□□□ -1.75
UBC11YOR339C YDR115WQ04598 105 aa4.09□□□□□ -1.75
UBC11YOR339C YDL022C-AP0C5L6 82 aa4.08□□□□□ -1.76
UBC11YOR339C MSL1P40567 111 aaPredicted RBP4.08□□□□□ -1.76
UBC11YOR339C LSM8P47093 109 aaKnown RBP4.08□□□□□ -1.76
UBC11YOR339C CGR1P53188 120 aa4.08□□□□□ -1.76
UBC11YOR339C AIM11P87275 137 aa4.08□□□□□ -1.76
UBC11YOR339C YMR295CQ03559 197 aa4.08□□□□□ -1.76
UBC11YOR339C BET5Q03630 159 aa4.08□□□□□ -1.76
UBC11YOR339C YPR195CQ06594 109 aa4.08□□□□□ -1.76
UBC11YOR339C YPL261CQ08976 102 aa4.08□□□□□ -1.76
UBC11YOR339C YDL157CQ12082 118 aa4.08□□□□□ -1.76
UBC11YOR339C DFM1Q12743 341 aaKnown RBP4.08□□□□□ -1.76
UBC11YOR339C RPL11AP0C0W9 174 aaKnown RBP4.07□□□□□ -1.76
UBC11YOR339C MRPL44P19956 98 aa4.07□□□□□ -1.76
UBC11YOR339C YLR194CQ05777 254 aa4.07□□□□□ -1.76
UBC11YOR339C NAT5Q08689 176 aa4.07□□□□□ -1.76
UBC11YOR339C RPL11BQ3E757 174 aaPredicted RBP4.07□□□□□ -1.76
UBC11YOR339C ENV10Q99382 181 aa4.07□□□□□ -1.76
UBC11YOR339C YAR029WP39549 74 aa4.06□□□□□ -1.76
UBC11YOR339C FYV7Q12247 151 aa4.06□□□□□ -1.76
UBC11YOR339C YKL044WP36092 106 aa4.05□□□□□ -1.76
UBC11YOR339C YKR041WP36134 250 aa4.05□□□□□ -1.76
UBC11YOR339C RPL32P38061 130 aaKnown RBP4.05□□□□□ -1.76
UBC11YOR339C YBL081WP38180 368 aaKnown RBP4.05□□□□□ -1.76
UBC11YOR339C SHU1P38751 150 aa4.05□□□□□ -1.76
UBC11YOR339C YAL064WP39711 94 aa4.05□□□□□ -1.76
UBC11YOR339C RPC10P40422 70 aa4.05□□□□□ -1.76
UBC11YOR339C SCM4P32564 187 aa4.04□□□□□ -1.76
UBC11YOR339C YEL067CP39978 195 aa4.04□□□□□ -1.76
UBC11YOR339C YPL073CP40323 161 aa4.04□□□□□ -1.76
UBC11YOR339C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.04□□□□□ -1.76not detected
UBC11YOR339C YAR023CD6VPM8 179 aa4.03□□□□□ -1.76
UBC11YOR339C RPL18AP0CX49 186 aaKnown RBP4.03□□□□□ -1.76
UBC11YOR339C RPL18BP0CX50 186 aaKnown RBP4.03□□□□□ -1.76
UBC11YOR339C ANB1P19211 157 aa4.03□□□□□ -1.76
UBC11YOR339C YCR007CP25354 239 aa4.03□□□□□ -1.76
UBC11YOR339C PEX17P40155 199 aa4.03□□□□□ -1.76
UBC11YOR339C CIN5P40917 295 aa4.03□□□□□ -1.76
UBC11YOR339C MRPS12P53732 153 aa4.03□□□□□ -1.76
UBC11YOR339C YMR175W-AQ3E766 64 aa4.03□□□□□ -1.76
UBC11YOR339C YAL065CO13511 128 aa4.02□□□□□ -1.77
UBC11YOR339C ATP5P09457 212 aa4.02□□□□□ -1.77
UBC11YOR339C COX14P39103 70 aa4.02□□□□□ -1.77
UBC11YOR339C YNR077CP53758 84 aa4.02□□□□□ -1.77
UBC11YOR339C RPL28P02406 149 aaKnown RBP4.01□□□□□ -1.77
UBC11YOR339C VTC1P40046 129 aaRIP-Chip data4.01□□□□□ -1.77not detected
UBC11YOR339C TOA2P32774 122 aa4□□□□□ -1.77
UBC11YOR339C RPF1P38805 295 aaKnown RBP4□□□□□ -1.77
UBC11YOR339C SAE3P89114 91 aa4□□□□□ -1.77
UBC11YOR339C YDL085C-AQ3E7B7 68 aaKnown RBP4□□□□□ -1.77
UBC11YOR339C IGO2Q9P305 131 aa4□□□□□ -1.77
UBC11YOR339C ADH1P00330 348 aaKnown RBP3.99□□□□□ -1.77
UBC11YOR339C QCR8P08525 94 aa3.99□□□□□ -1.77
UBC11YOR339C GAT4P40569 121 aa3.99□□□□□ -1.77
UBC11YOR339C YFR057WP43625 151 aa3.99□□□□□ -1.77
UBC11YOR339C YNL190WP53872 204 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 98.9 ms