RNA–Protein interactions for RNA: YOR006C

TSR3, Transcript of Protein required for 20S pre-rRNA processing, yeast

Gene TSR3, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR3	YOR006C	COX19	Q3E731	98 aa		4.66	□□□□□ -1.66
TSR3	YOR006C	ADH1	P00330	348 aa	Known RBP	4.65	□□□□□ -1.67
TSR3	YOR006C	YPR170W-B	P0C5R9	85 aa		4.65	□□□□□ -1.67
TSR3	YOR006C	APS1	P35181	156 aa		4.65	□□□□□ -1.67
TSR3	YOR006C	MIG3	P39943	394 aa		4.65	□□□□□ -1.67
TSR3	YOR006C	THG1	P53215	237 aa	Known RBP	4.65	□□□□□ -1.67
TSR3	YOR006C	SEN15	Q04675	128 aa		4.65	□□□□□ -1.67
TSR3	YOR006C	PAU1	P0CE88	120 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	PAU14	P0CE89	120 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	PAU6	P0CE90	120 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	PAU18	P0CE91	120 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	PAU8	P0CE92	120 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	PAU11	P0CE93	120 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	HMRA1	P0CY11	126 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	PAU13	P38725	120 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	YHR173C	P38864	112 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	MSL1	P40567	111 aa	Predicted RBP	4.64	□□□□□ -1.67
TSR3	YOR006C	RPR2	P40571	144 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	PAU10	Q03050	120 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	PAU20	Q08322	120 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	CCW12	Q12127	133 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	PAU9	Q3E770	120 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	YBL112C	Q3E7Y4	105 aa		4.64	□□□□□ -1.67
TSR3	YOR006C	RPS11A	P0CX47	156 aa	Known RBP	4.63	□□□□□ -1.67
TSR3	YOR006C	RPS11B	P0CX48	156 aa	Known RBP	4.63	□□□□□ -1.67
TSR3	YOR006C	COX10	P21592	462 aa		4.63	□□□□□ -1.67
TSR3	YOR006C	MRPL11	P36521	249 aa	Predicted RBP	4.63	□□□□□ -1.67
TSR3	YOR006C	YGR164W	P53291	111 aa		4.63	□□□□□ -1.67
TSR3	YOR006C	TOM7	P53507	60 aa		4.63	□□□□□ -1.67
TSR3	YOR006C	RDS3	Q06835	107 aa	Predicted RBP	4.63	□□□□□ -1.67
TSR3	YOR006C	YDR029W	Q12111	104 aa		4.63	□□□□□ -1.67
TSR3	YOR006C	YHR022C	P38763	256 aa		4.62	□□□□□ -1.67
TSR3	YOR006C	KRE9	P39005	276 aa		4.62	□□□□□ -1.67
TSR3	YOR006C	KEG1	P43614	200 aa		4.62	□□□□□ -1.67
TSR3	YOR006C	YGL034C	P53186	121 aa		4.62	□□□□□ -1.67
TSR3	YOR006C	YMR103C	Q04436	120 aa		4.62	□□□□□ -1.67
TSR3	YOR006C	PAU23	Q07987	124 aa		4.62	□□□□□ -1.67
TSR3	YOR006C	PAU17	Q12370	124 aa		4.62	□□□□□ -1.67
TSR3	YOR006C	TSC3	Q3E790	80 aa		4.62	□□□□□ -1.67
TSR3	YOR006C	ECM12	O13529	151 aa		4.61	□□□□□ -1.67
TSR3	YOR006C	RPS22A	P0C0W1	130 aa	Known RBP	4.61	□□□□□ -1.67
TSR3	YOR006C	YGL010W	P25338	174 aa		4.61	□□□□□ -1.67
TSR3	YOR006C	CYB5	P40312	120 aa		4.61	□□□□□ -1.67
TSR3	YOR006C	YFR035C	P43608	114 aa		4.61	□□□□□ -1.67
TSR3	YOR006C	YIL134C-A	Q45U18	67 aa		4.61	□□□□□ -1.67
TSR3	YOR006C	SPT4	P32914	102 aa	Predicted RBP	4.6	□□□□□ -1.67
TSR3	YOR006C	YKR070W	P36151	352 aa	Known RBP	4.6	□□□□□ -1.67
TSR3	YOR006C	YHR140W	P38842	239 aa		4.6	□□□□□ -1.67
TSR3	YOR006C	HUA1	P40325	198 aa		4.6	□□□□□ -1.67
TSR3	YOR006C	YFL065C	P43539	102 aa		4.6	□□□□□ -1.67
TSR3	YOR006C	HAL1	Q01766	294 aa		4.6	□□□□□ -1.67
TSR3	YOR006C	SGF11	Q03067	99 aa		4.6	□□□□□ -1.67
TSR3	YOR006C	YPR203W	Q08994	102 aa		4.6	□□□□□ -1.67
TSR3	YOR006C	DAD1	Q12248	94 aa		4.6	□□□□□ -1.67
TSR3	YOR006C	YNR034W-A	Q3E841	98 aa		4.6	□□□□□ -1.67
TSR3	YOR006C	ADH3	P07246	375 aa	Known RBP	4.59	□□□□□ -1.67
TSR3	YOR006C	ATG8	P38182	117 aa	RIP-Chip data	4.59	□□□□□ -1.67	not detected
TSR3	YOR006C	PEX17	P40155	199 aa		4.59	□□□□□ -1.67
TSR3	YOR006C	YMR141C	P40211	102 aa		4.59	□□□□□ -1.67
TSR3	YOR006C	YIL163C	P40448	117 aa		4.59	□□□□□ -1.67
TSR3	YOR006C	DAD4	P69851	72 aa		4.59	□□□□□ -1.67
TSR3	YOR006C	FCF1	Q05498	189 aa	Predicted RBP	4.59	□□□□□ -1.67
TSR3	YOR006C	VAM10	Q08474	114 aa		4.59	□□□□□ -1.67
TSR3	YOR006C	YCR001W	P25347	104 aa		4.58	□□□□□ -1.68
TSR3	YOR006C	AGA1	P32323	725 aa		4.58	□□□□□ -1.68
TSR3	YOR006C	YAR029W	P39549	74 aa		4.58	□□□□□ -1.68
TSR3	YOR006C	YER181C	P40097	107 aa		4.58	□□□□□ -1.68
TSR3	YOR006C	YPS5	P53057	165 aa		4.58	□□□□□ -1.68
TSR3	YOR006C	CYT2	Q00873	224 aa		4.58	□□□□□ -1.68
TSR3	YOR006C	YLR342W-A	Q3E810	57 aa		4.58	□□□□□ -1.68
TSR3	YOR006C	YOL085C	Q99345	113 aa		4.58	□□□□□ -1.68
TSR3	YOR006C	TRP1	P00912	224 aa		4.57	□□□□□ -1.68
TSR3	YOR006C	YOR105W	Q08504	108 aa		4.57	□□□□□ -1.68
TSR3	YOR006C	HTL1	Q9URQ5	78 aa		4.57	□□□□□ -1.68
TSR3	YOR006C	MBF1	O14467	151 aa	Known RBP	4.56	□□□□□ -1.68
TSR3	YOR006C	Q0255	P03881	472 aa		4.56	□□□□□ -1.68
TSR3	YOR006C	SPI1	P40092	148 aa		4.56	□□□□□ -1.68
TSR3	YOR006C	YGL088W	P53151	121 aa		4.56	□□□□□ -1.68
TSR3	YOR006C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	RIP-Chip
TSR3	YOR006C	ATP19	P81451	68 aa		4.56	□□□□□ -1.68
TSR3	YOR006C	BET5	Q03630	159 aa		4.56	□□□□□ -1.68
TSR3	YOR006C	VMA9	Q3E7B6	73 aa		4.56	□□□□□ -1.68
TSR3	YOR006C	ATX1	P38636	73 aa		4.55	□□□□□ -1.68
TSR3	YOR006C	CWP2	P43497	92 aa		4.55	□□□□□ -1.68
TSR3	YOR006C	SMT3	Q12306	101 aa	Known RBP	4.55	□□□□□ -1.68
TSR3	YOR006C	PHS1	P40857	217 aa		4.54	□□□□□ -1.68
TSR3	YOR006C	NAT5	Q08689	176 aa		4.54	□□□□□ -1.68
TSR3	YOR006C	TIM22	Q12328	207 aa		4.54	□□□□□ -1.68
TSR3	YOR006C	VMA21	P41806	77 aa		4.53	□□□□□ -1.68
TSR3	YOR006C	POR1	P04840	283 aa	Known RBP	4.51	□□□□□ -1.69
TSR3	YOR006C	YCR085W	P25650	117 aa		4.51	□□□□□ -1.69
TSR3	YOR006C	FZF1	P32805	299 aa		4.51	□□□□□ -1.69
TSR3	YOR006C	MIX23	P38162	196 aa		4.51	□□□□□ -1.69
TSR3	YOR006C	YBR200W-A	Q3E755	54 aa		4.51	□□□□□ -1.69
TSR3	YOR006C	YGR240C-A	Q3E786	66 aa		4.51	□□□□□ -1.69
TSR3	YOR006C	YCL021W-A	Q96VH3	125 aa		4.51	□□□□□ -1.69
TSR3	YOR006C	HSP10	P38910	106 aa		4.5	□□□□□ -1.69
TSR3	YOR006C	IRC22	P40006	225 aa		4.5	□□□□□ -1.69
TSR3	YOR006C	RRT13	P40042	185 aa		4.5	□□□□□ -1.69
TSR3	YOR006C	BNS1	P50084	137 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms