RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W YPK9Q12697 1472 aa1.69□□□□□ -2.14
TRM112YNR046W PAU19P0CE85 124 aa1.69□□□□□ -2.14
TRM112YNR046W PAU3P25610 124 aa1.69□□□□□ -2.14
TRM112YNR046W PAU24P38155 120 aa1.69□□□□□ -2.14
TRM112YNR046W RPL22BP56628 122 aaKnown RBP1.69□□□□□ -2.14
TRM112YNR046W YDR042CQ03205 200 aa1.69□□□□□ -2.14
TRM112YNR046W YHR213W-AQ8TGT4 77 aa1.69□□□□□ -2.14
TRM112YNR046W OST5Q92316 86 aa1.69□□□□□ -2.14
TRM112YNR046W RRP5Q05022 1729 aaKnown RBP1.69□□□□□ -2.14
TRM112YNR046W ATG8P38182 117 aaRIP-Chip data1.68□□□□□ -2.14not detected
TRM112YNR046W YHL037CP38733 133 aa1.68□□□□□ -2.14
TRM112YNR046W YFL051CP43552 160 aa1.68□□□□□ -2.14
TRM112YNR046W YLR363W-AQ3E747 85 aa1.68□□□□□ -2.14
TRM112YNR046W PCC1Q3E833 88 aa1.68□□□□□ -2.14
TRM112YNR046W ROM2P51862 1356 aaKnown RBP1.68□□□□□ -2.14
TRM112YNR046W NUP159P40477 1460 aa1.68□□□□□ -2.14
TRM112YNR046W DNA2P38859 1522 aa1.67□□□□□ -2.14
TRM112YNR046W SLH1P53327 1967 aaKnown RBP1.67□□□□□ -2.14
TRM112YNR046W RTC6O14464 93 aa1.67□□□□□ -2.14
TRM112YNR046W YCR085WP25650 117 aa1.67□□□□□ -2.14
TRM112YNR046W PAU16P35994 123 aa1.67□□□□□ -2.14
TRM112YNR046W PAU15P40585 124 aa1.67□□□□□ -2.14
TRM112YNR046W SNN1P48232 102 aa1.67□□□□□ -2.14
TRM112YNR046W YIL014C-AQ02598 104 aa1.67□□□□□ -2.14
TRM112YNR046W VAM10Q08474 114 aa1.67□□□□□ -2.14
TRM112YNR046W POC4Q12245 148 aaPredicted RBP1.67□□□□□ -2.14
TRM112YNR046W CMC4Q3E7A9 73 aa1.67□□□□□ -2.14
TRM112YNR046W DOP1Q03921 1698 aa1.67□□□□□ -2.14
TRM112YNR046W SIN3P22579 1536 aa1.66□□□□□ -2.14
TRM112YNR046W RPL36BO14455 100 aaKnown RBP1.66□□□□□ -2.14
TRM112YNR046W PAI3P01094 68 aa1.66□□□□□ -2.14
TRM112YNR046W RPL36AP05745 100 aaPredicted RBP1.66□□□□□ -2.14
TRM112YNR046W YHR213WP0CI67 198 aa1.66□□□□□ -2.14
TRM112YNR046W HSP150P32478 413 aa1.66□□□□□ -2.14
TRM112YNR046W YBR013CP38215 129 aa1.66□□□□□ -2.14
TRM112YNR046W YLR194CQ05777 254 aa1.66□□□□□ -2.14
TRM112YNR046W MHF1Q3E835 90 aa1.66□□□□□ -2.14
TRM112YNR046W TCB3Q03640 1545 aaKnown RBP1.66□□□□□ -2.14
TRM112YNR046W GDB1Q06625 1536 aa1.66□□□□□ -2.14
TRM112YNR046W YFR010W-AP0C5N0 62 aa1.65□□□□□ -2.15
TRM112YNR046W RPA12P32529 125 aaKnown RBP1.65□□□□□ -2.15
TRM112YNR046W SRX1P36077 127 aa1.65□□□□□ -2.15
TRM112YNR046W YHL005CP38752 130 aa1.65□□□□□ -2.15
TRM112YNR046W COX23P38824 151 aa1.65□□□□□ -2.15
TRM112YNR046W GCV3P39726 170 aaPredicted RBP1.65□□□□□ -2.15
TRM112YNR046W RSM18P40033 138 aa1.65□□□□□ -2.15
TRM112YNR046W YIR020CP40575 100 aa1.65□□□□□ -2.15
TRM112YNR046W YMR175W-AQ3E766 64 aa1.65□□□□□ -2.15
TRM112YNR046W ENV10Q99382 181 aa1.65□□□□□ -2.15
TRM112YNR046W FKS3Q04952 1785 aa1.64□□□□□ -2.15
TRM112YNR046W YJL197C-AP0C5P0 93 aa1.64□□□□□ -2.15
TRM112YNR046W PAU5P43575 122 aa1.64□□□□□ -2.15
TRM112YNR046W ICY1Q04329 127 aa1.64□□□□□ -2.15
TRM112YNR046W HPA2Q06592 156 aa1.64□□□□□ -2.15
TRM112YNR046W PRM3Q08931 133 aa1.64□□□□□ -2.15
TRM112YNR046W ACC1Q00955 2233 aaKnown RBP1.64□□□□□ -2.15
TRM112YNR046W YLR419WQ06698 1435 aaKnown RBP1.64□□□□□ -2.15
TRM112YNR046W MMS22Q06164 1454 aa1.63□□□□□ -2.15
TRM112YNR046W SSS1P35179 80 aa1.63□□□□□ -2.15
TRM112YNR046W YBR027CP38220 110 aa1.63□□□□□ -2.15
TRM112YNR046W ICS3P47034 131 aa1.63□□□□□ -2.15
TRM112YNR046W SMC4Q12267 1418 aa1.63□□□□□ -2.15
TRM112YNR046W MON2P48563 1636 aaPredicted RBP1.62□□□□□ -2.15
TRM112YNR046W RPS22AP0C0W1 130 aaKnown RBP1.62□□□□□ -2.15
TRM112YNR046W HMRA2P0CY13 119 aa1.62□□□□□ -2.15
TRM112YNR046W TOM6P33448 61 aa1.62□□□□□ -2.15
TRM112YNR046W HUA1P40325 198 aa1.62□□□□□ -2.15
TRM112YNR046W IMP2P46972 177 aa1.62□□□□□ -2.15
TRM112YNR046W MHF2Q3E829 80 aa1.62□□□□□ -2.15
TRM112YNR046W MOT1P32333 1867 aa1.62□□□□□ -2.15
TRM112YNR046W YRF1-1P0CX20 1796 aa1.62□□□□□ -2.15
TRM112YNR046W YRF1-5P0CX21 1796 aa1.62□□□□□ -2.15
TRM112YNR046W YRF1-8P0CX22 1796 aa1.62□□□□□ -2.15
TRM112YNR046W TY4B-HP0C2J7 1802 aa1.61□□□□□ -2.15
TRM112YNR046W TY4B-JP47024 1803 aa1.61□□□□□ -2.15
TRM112YNR046W BPT1P14772 1559 aa1.61□□□□□ -2.15
TRM112YNR046W SRB8P25648 1427 aa1.61□□□□□ -2.15
TRM112YNR046W ROX3P25046 220 aa1.61□□□□□ -2.15
TRM112YNR046W YAR064WP39563 99 aa1.61□□□□□ -2.15
TRM112YNR046W SWM2P40342 146 aa1.61□□□□□ -2.15
TRM112YNR046W IQG1Q12280 1495 aa1.61□□□□□ -2.15
TRM112YNR046W HAP1P0CE41 1502 aa1.61□□□□□ -2.15
TRM112YNR046W DNF1P32660 1571 aa1.6□□□□□ -2.15
TRM112YNR046W USO1P25386 1790 aa1.6□□□□□ -2.15
TRM112YNR046W PMD1P32634 1753 aa1.6□□□□□ -2.15
TRM112YNR046W BRR2P32639 2163 aaKnown RBP1.6□□□□□ -2.15
TRM112YNR046W NHP2P32495 156 aaPredicted RBP1.6□□□□□ -2.15
TRM112YNR046W POR2P40478 281 aa1.6□□□□□ -2.15
TRM112YNR046W YOL118CQ08259 102 aa1.6□□□□□ -2.15
TRM112YNR046W YDR119W-AQ2V2P9 66 aa1.6□□□□□ -2.15
TRM112YNR046W RPS22BQ3E7Y3 130 aaKnown RBP1.6□□□□□ -2.15
TRM112YNR046W POL1P13382 1468 aa1.6□□□□□ -2.15
TRM112YNR046W XRN1P22147 1528 aaKnown RBP1.6□□□□□ -2.15
TRM112YNR046W UTP10P42945 1769 aaKnown RBP1.59□□□□□ -2.15
TRM112YNR046W YGL014C-AP0C5N1 53 aa1.59□□□□□ -2.15
TRM112YNR046W ATX1P38636 73 aa1.59□□□□□ -2.15
TRM112YNR046W YIL102CP40488 101 aa1.59□□□□□ -2.15
TRM112YNR046W LSM6Q06406 86 aaKnown RBP1.59□□□□□ -2.15
TRM112YNR046W YOL131WQ08270 108 aa1.59□□□□□ -2.15
TRM112YNR046W YPR145C-AQ2V2P0 78 aa1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms