RNA–Protein interactions for RNA: YNR015W

SMM1, Transcript of Dihydrouridine synthase, yeastyeast

Gene SMM1, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMM1YNR015W YMR320WQ04897 101 aa6.51□□□□□ -1.37
SMM1YNR015W ADH2P00331 348 aaKnown RBP6.5□□□□□ -1.37
SMM1YNR015W TRP1P00912 224 aa6.5□□□□□ -1.37
SMM1YNR015W AIM29P36154 155 aa6.5□□□□□ -1.37
SMM1YNR015W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
SMM1YNR015W RRT15Q3E811 62 aa6.5□□□□□ -1.37
SMM1YNR015W YPR010C-AA5Z2X5 72 aa6.49□□□□□ -1.37
SMM1YNR015W RPL11AP0C0W9 174 aaKnown RBP6.49□□□□□ -1.37
SMM1YNR015W SVP26P38869 228 aa6.49□□□□□ -1.37
SMM1YNR015W ERG28P40030 148 aa6.49□□□□□ -1.37
SMM1YNR015W RPL11BQ3E757 174 aaPredicted RBP6.49□□□□□ -1.37
SMM1YNR015W GAT4P40569 121 aa6.48□□□□□ -1.37
SMM1YNR015W ERV14P53173 138 aa6.48□□□□□ -1.37
SMM1YNR015W YDR042CQ03205 200 aa6.48□□□□□ -1.37
SMM1YNR015W PKR1Q03880 122 aaKnown RBP6.48□□□□□ -1.37
SMM1YNR015W HTL1Q9URQ5 78 aa6.48□□□□□ -1.37
SMM1YNR015W YEL008WP40001 126 aa6.47□□□□□ -1.37
SMM1YNR015W URM1P40554 99 aaPredicted RBP6.46□□□□□ -1.38
SMM1YNR015W HMRA2P0CY13 119 aa6.45□□□□□ -1.38
SMM1YNR015W ANB1P19211 157 aa6.45□□□□□ -1.38
SMM1YNR015W POP3P53833 195 aaPredicted RBP6.45□□□□□ -1.38
SMM1YNR015W CUE4Q04201 117 aaPredicted RBP6.45□□□□□ -1.38
SMM1YNR015W YLR112WQ12130 139 aa6.45□□□□□ -1.38
SMM1YNR015W COA3Q3E7B2 85 aa6.45□□□□□ -1.38
SMM1YNR015W YCL021W-AQ96VH3 125 aa6.45□□□□□ -1.38
SMM1YNR015W RPL27BP0C2H7 136 aaKnown RBP6.44□□□□□ -1.38
SMM1YNR015W YER085CP40058 173 aa6.44□□□□□ -1.38
SMM1YNR015W SSS1P35179 80 aa6.43□□□□□ -1.38
SMM1YNR015W YBR219CP38317 127 aa6.43□□□□□ -1.38
SMM1YNR015W OST3P48439 350 aa6.43□□□□□ -1.38
SMM1YNR015W ATP16Q12165 160 aa6.43□□□□□ -1.38
SMM1YNR015W BET5Q03630 159 aa6.42□□□□□ -1.38
SMM1YNR015W TPT1Q12272 230 aaKnown RBP6.42□□□□□ -1.38
SMM1YNR015W CMC2Q3E7A4 109 aa6.42□□□□□ -1.38
SMM1YNR015W RPL31AP0C2H8 113 aaKnown RBP6.41□□□□□ -1.38
SMM1YNR015W RPC10P40422 70 aa6.41□□□□□ -1.38
SMM1YNR015W ENV10Q99382 181 aa6.41□□□□□ -1.38
SMM1YNR015W YMR103CQ04436 120 aa6.4□□□□□ -1.38
SMM1YNR015W YAR023CD6VPM8 179 aa6.39□□□□□ -1.39
SMM1YNR015W YMR295CQ03559 197 aa6.39□□□□□ -1.39
SMM1YNR015W SEN15Q04675 128 aa6.39□□□□□ -1.39
SMM1YNR015W ATP15P21306 62 aa6.38□□□□□ -1.39
SMM1YNR015W YAR029WP39549 74 aa6.38□□□□□ -1.39
SMM1YNR015W LCL2Q08045 131 aa6.38□□□□□ -1.39
SMM1YNR015W YPL229WQ99395 206 aa6.38□□□□□ -1.39
SMM1YNR015W APS1P35181 156 aa6.37□□□□□ -1.39
SMM1YNR015W PAU16P35994 123 aa6.37□□□□□ -1.39
SMM1YNR015W YKL070WP36087 169 aa6.37□□□□□ -1.39
SMM1YNR015W YBL081WP38180 368 aaKnown RBP6.37□□□□□ -1.39
SMM1YNR015W FYV4P38783 130 aaPredicted RBP6.37□□□□□ -1.39
SMM1YNR015W YAL064WP39711 94 aa6.37□□□□□ -1.39
SMM1YNR015W YLR194CQ05777 254 aa6.37□□□□□ -1.39
SMM1YNR015W YIL134C-AQ45U18 67 aa6.37□□□□□ -1.39
SMM1YNR015W YMR175W-AQ3E766 64 aa6.36□□□□□ -1.39
SMM1YNR015W DUT1P33317 147 aa6.35□□□□□ -1.39
SMM1YNR015W MRPL11P36521 249 aaPredicted RBP6.35□□□□□ -1.39
SMM1YNR015W GIS2P53849 153 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
SMM1YNR015W YDR034C-AP0C289 58 aa6.34□□□□□ -1.39
SMM1YNR015W CNL1Q06333 122 aa6.34□□□□□ -1.39
SMM1YNR015W YLR050CQ12155 161 aaKnown RBP6.33□□□□□ -1.4
SMM1YNR015W COA6Q3E846 104 aa6.33□□□□□ -1.4
SMM1YNR015W YAL065CO13511 128 aa6.32□□□□□ -1.4
SMM1YNR015W YDL022C-AP0C5L6 82 aa6.32□□□□□ -1.4
SMM1YNR015W DFM1Q12743 341 aaKnown RBP6.32□□□□□ -1.4
SMM1YNR015W SCS22Q6Q595 175 aa6.32□□□□□ -1.4
SMM1YNR015W CIN5P40917 295 aa6.31□□□□□ -1.4
SMM1YNR015W AIM11P87275 137 aa6.31□□□□□ -1.4
SMM1YNR015W SHU1P38751 150 aa6.3□□□□□ -1.4
SMM1YNR015W HAC1P41546 238 aa6.3□□□□□ -1.4
SMM1YNR015W YPL261CQ08976 102 aa6.3□□□□□ -1.4
SMM1YNR015W SEC11P15367 167 aa6.29□□□□□ -1.4
SMM1YNR015W COX14P39103 70 aa6.29□□□□□ -1.4
SMM1YNR015W YDL241WQ07738 123 aa6.29□□□□□ -1.4
SMM1YNR015W SNA2P56508 79 aa6.28□□□□□ -1.4
SMM1YNR015W YDR029WQ12111 104 aa6.28□□□□□ -1.4
SMM1YNR015W YKR041WP36134 250 aa6.27□□□□□ -1.41
SMM1YNR015W SMP1P38128 452 aa6.27□□□□□ -1.41
SMM1YNR015W VTC1P40046 129 aaRIP-Chip data6.27□□□□□ -1.41not detected
SMM1YNR015W TOA2P32774 122 aa6.26□□□□□ -1.41
SMM1YNR015W PEX17P40155 199 aa6.26□□□□□ -1.41
SMM1YNR015W RPL32P38061 130 aaKnown RBP6.25□□□□□ -1.41
SMM1YNR015W YGL230CP53074 147 aa6.25□□□□□ -1.41
SMM1YNR015W RPL18AP0CX49 186 aaKnown RBP6.24□□□□□ -1.41
SMM1YNR015W RPL18BP0CX50 186 aaKnown RBP6.24□□□□□ -1.41
SMM1YNR015W MRPL44P19956 98 aa6.24□□□□□ -1.41
SMM1YNR015W YKL044WP36092 106 aa6.24□□□□□ -1.41
SMM1YNR015W MRPS12P53732 153 aa6.24□□□□□ -1.41
SMM1YNR015W PPT2Q12036 173 aa6.24□□□□□ -1.41
SMM1YNR015W QCR8P08525 94 aa6.23□□□□□ -1.41
SMM1YNR015W ADH1P00330 348 aaKnown RBP6.22□□□□□ -1.41
SMM1YNR015W YEL067CP39978 195 aa6.22□□□□□ -1.41
SMM1YNR015W MSL1P40567 111 aaPredicted RBP6.22□□□□□ -1.41
SMM1YNR015W YDL157CQ12082 118 aa6.21□□□□□ -1.42
SMM1YNR015W AQY2P0CD90 149 aa6.2□□□□□ -1.42
SMM1YNR015W PEX22P39718 180 aa6.2□□□□□ -1.42
SMM1YNR015W YPL073CP40323 161 aa6.2□□□□□ -1.42
SMM1YNR015W SMD1Q02260 146 aaPredicted RBP6.2□□□□□ -1.42
SMM1YNR015W RPL28P02406 149 aaKnown RBP6.19□□□□□ -1.42
SMM1YNR015W FUN14P18411 198 aa6.19□□□□□ -1.42
SMM1YNR015W OXA1P39952 402 aa6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms