RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A ADH2P00331 348 aaKnown RBP4.88□□□□□ -1.63
KSH1YNL024C-A PRE1P22141 198 aaKnown RBP4.88□□□□□ -1.63
KSH1YNL024C-A YKL070WP36087 169 aa4.88□□□□□ -1.63
KSH1YNL024C-A RRT13P40042 185 aa4.88□□□□□ -1.63
KSH1YNL024C-A COA3Q3E7B2 85 aa4.88□□□□□ -1.63
KSH1YNL024C-A TRP1P00912 224 aa4.87□□□□□ -1.63
KSH1YNL024C-A HMRA2P0CY13 119 aa4.87□□□□□ -1.63
KSH1YNL024C-A MRP49P32388 137 aa4.87□□□□□ -1.63
KSH1YNL024C-A UIP3P39547 235 aa4.87□□□□□ -1.63
KSH1YNL024C-A YLR042CQ07990 161 aa4.87□□□□□ -1.63
KSH1YNL024C-A DGA1Q08650 418 aa4.87□□□□□ -1.63
KSH1YNL024C-A DUO1P53168 247 aaKnown RBP4.86□□□□□ -1.63
KSH1YNL024C-A MSC3Q05812 728 aa4.86□□□□□ -1.63
KSH1YNL024C-A MHR1Q06630 226 aa4.86□□□□□ -1.63
KSH1YNL024C-A YLR363W-AQ3E747 85 aa4.86□□□□□ -1.63
KSH1YNL024C-A SCS22Q6Q595 175 aa4.86□□□□□ -1.63
KSH1YNL024C-A MIG1P27705 504 aa4.85□□□□□ -1.63
KSH1YNL024C-A YPL073CP40323 161 aa4.85□□□□□ -1.63
KSH1YNL024C-A YJR146WP47174 117 aa4.85□□□□□ -1.63
KSH1YNL024C-A PMP3P87284 55 aa4.85□□□□□ -1.63
KSH1YNL024C-A YGR240C-AQ3E786 66 aa4.85□□□□□ -1.63
KSH1YNL024C-A YAR029WP39549 74 aa4.84□□□□□ -1.63
KSH1YNL024C-A YPS5P53057 165 aa4.84□□□□□ -1.63
KSH1YNL024C-A COX12Q01519 83 aa4.84□□□□□ -1.63
KSH1YNL024C-A UBC5P15732 148 aa4.83□□□□□ -1.64
KSH1YNL024C-A RPL16AP26784 199 aaKnown RBP4.83□□□□□ -1.64
KSH1YNL024C-A RPL32P38061 130 aaKnown RBP4.83□□□□□ -1.64
KSH1YNL024C-A YFR035CP43608 114 aa4.83□□□□□ -1.64
KSH1YNL024C-A DFM1Q12743 341 aaKnown RBP4.83□□□□□ -1.64
KSH1YNL024C-A YNL217WP40152 326 aa4.82□□□□□ -1.64
KSH1YNL024C-A AGE2P40529 298 aa4.82□□□□□ -1.64
KSH1YNL024C-A ERI1P62651 68 aaKnown RBP4.82□□□□□ -1.64
KSH1YNL024C-A VAM10Q08474 114 aa4.82□□□□□ -1.64
KSH1YNL024C-A YPL261CQ08976 102 aa4.82□□□□□ -1.64
KSH1YNL024C-A YKL023C-AQ2V2P3 75 aa4.82□□□□□ -1.64
KSH1YNL024C-A IGO2Q9P305 131 aa4.81□□□□□ -1.64
KSH1YNL024C-A RPS8AP0CX39 200 aaKnown RBP4.8□□□□□ -1.64
KSH1YNL024C-A RPS8BP0CX40 200 aaKnown RBP4.8□□□□□ -1.64
KSH1YNL024C-A YKR041WP36134 250 aa4.8□□□□□ -1.64
KSH1YNL024C-A RPF1P38805 295 aaKnown RBP4.8□□□□□ -1.64
KSH1YNL024C-A KRE9P39005 276 aa4.8□□□□□ -1.64
KSH1YNL024C-A PEX17P40155 199 aa4.8□□□□□ -1.64
KSH1YNL024C-A AIM11P87275 137 aa4.8□□□□□ -1.64
KSH1YNL024C-A SCW10Q04951 389 aa4.8□□□□□ -1.64
KSH1YNL024C-A YLR281CQ05863 155 aa4.8□□□□□ -1.64
KSH1YNL024C-A YPR170W-BP0C5R9 85 aa4.79□□□□□ -1.64
KSH1YNL024C-A ELC1Q03071 99 aa4.79□□□□□ -1.64
KSH1YNL024C-A YLR194CQ05777 254 aa4.79□□□□□ -1.64
KSH1YNL024C-A YLR296WQ05898 108 aa4.79□□□□□ -1.64
KSH1YNL024C-A YMR122W-AQ3E842 84 aa4.79□□□□□ -1.64
KSH1YNL024C-A MBF1O14467 151 aaKnown RBP4.78□□□□□ -1.64
KSH1YNL024C-A QCR8P08525 94 aa4.78□□□□□ -1.64
KSH1YNL024C-A AIM29P36154 155 aa4.78□□□□□ -1.64
KSH1YNL024C-A SGF11Q03067 99 aa4.78□□□□□ -1.64
KSH1YNL024C-A ATP15P21306 62 aa4.77□□□□□ -1.65
KSH1YNL024C-A YEL008WP40001 126 aa4.77□□□□□ -1.65
KSH1YNL024C-A ARC15P40518 154 aaRIP-Chip data4.77□□□□□ -1.65not detected
KSH1YNL024C-A PPT2Q12036 173 aa4.77□□□□□ -1.65
KSH1YNL024C-A YCL021W-AQ96VH3 125 aa4.77□□□□□ -1.65
KSH1YNL024C-A YPR010C-AA5Z2X5 72 aa4.76□□□□□ -1.65
KSH1YNL024C-A POP7P38291 140 aa4.76□□□□□ -1.65
KSH1YNL024C-A YIL102C-AQ2V2P5 75 aa4.76□□□□□ -1.65
KSH1YNL024C-A ANB1P19211 157 aa4.75□□□□□ -1.65
KSH1YNL024C-A YBR209WP38311 105 aa4.75□□□□□ -1.65
KSH1YNL024C-A SHU1P38751 150 aa4.75□□□□□ -1.65
KSH1YNL024C-A ERG28P40030 148 aa4.75□□□□□ -1.65
KSH1YNL024C-A YER181CP40097 107 aa4.75□□□□□ -1.65
KSH1YNL024C-A YIL059CP40520 121 aa4.75□□□□□ -1.65
KSH1YNL024C-A PAI3P01094 68 aa4.74□□□□□ -1.65
KSH1YNL024C-A YDL022C-AP0C5L6 82 aa4.74□□□□□ -1.65
KSH1YNL024C-A DUT1P33317 147 aa4.74□□□□□ -1.65
KSH1YNL024C-A OXA1P39952 402 aa4.74□□□□□ -1.65
KSH1YNL024C-A YNR077CP53758 84 aa4.74□□□□□ -1.65
KSH1YNL024C-A RDS3Q06835 107 aaPredicted RBP4.74□□□□□ -1.65
KSH1YNL024C-A CRC1Q12289 327 aa4.74□□□□□ -1.65
KSH1YNL024C-A RPL18AP0CX49 186 aaKnown RBP4.73□□□□□ -1.65
KSH1YNL024C-A RPL18BP0CX50 186 aaKnown RBP4.73□□□□□ -1.65
KSH1YNL024C-A YCR001WP25347 104 aa4.73□□□□□ -1.65
KSH1YNL024C-A YEL067CP39978 195 aa4.73□□□□□ -1.65
KSH1YNL024C-A ENV10Q99382 181 aa4.73□□□□□ -1.65
KSH1YNL024C-A CIN5P40917 295 aa4.72□□□□□ -1.65
KSH1YNL024C-A SPC1P46965 94 aa4.72□□□□□ -1.65
KSH1YNL024C-A COX14P39103 70 aa4.71□□□□□ -1.66
KSH1YNL024C-A YGL088WP53151 121 aa4.71□□□□□ -1.66
KSH1YNL024C-A MRPS12P53732 153 aa4.71□□□□□ -1.66
KSH1YNL024C-A ADH1P00330 348 aaKnown RBP4.7□□□□□ -1.66
KSH1YNL024C-A RPL11AP0C0W9 174 aaKnown RBP4.7□□□□□ -1.66
KSH1YNL024C-A HYP2P23301 157 aaKnown RBP4.7□□□□□ -1.66
KSH1YNL024C-A UGX2P32772 223 aa4.7□□□□□ -1.66
KSH1YNL024C-A YPT53P36019 220 aa4.7□□□□□ -1.66
KSH1YNL024C-A YER085CP40058 173 aa4.7□□□□□ -1.66
KSH1YNL024C-A YDL241WQ07738 123 aa4.7□□□□□ -1.66
KSH1YNL024C-A RPL11BQ3E757 174 aaPredicted RBP4.7□□□□□ -1.66
KSH1YNL024C-A YMR175W-AQ3E766 64 aa4.7□□□□□ -1.66
KSH1YNL024C-A TOA2P32774 122 aa4.69□□□□□ -1.66
KSH1YNL024C-A HAL1Q01766 294 aa4.69□□□□□ -1.66
KSH1YNL024C-A YMR295CQ03559 197 aa4.69□□□□□ -1.66
KSH1YNL024C-A LSM6Q06406 86 aaKnown RBP4.69□□□□□ -1.66
KSH1YNL024C-A VTS1Q08831 523 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
KSH1YNL024C-A RPL28P02406 149 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms