RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C YEL008WP40001 126 aa2.26□□□□□ -2.05
CUS1YMR240C PMD1P32634 1753 aa2.26□□□□□ -2.05
CUS1YMR240C YEL014CP39999 101 aa2.25□□□□□ -2.05
CUS1YMR240C DCV1P43595 202 aa2.25□□□□□ -2.05
CUS1YMR240C YMR090WQ04304 227 aaKnown RBP2.25□□□□□ -2.05
CUS1YMR240C SWC7Q06707 132 aa2.25□□□□□ -2.05
CUS1YMR240C AIM18P38884 321 aa2.24□□□□□ -2.05
CUS1YMR240C BRP1P53194 125 aa2.24□□□□□ -2.05
CUS1YMR240C GPI11Q06636 219 aa2.24□□□□□ -2.05
CUS1YMR240C YLR365WQ7LIF2 110 aa2.24□□□□□ -2.05
CUS1YMR240C FUN14P18411 198 aa2.23□□□□□ -2.05
CUS1YMR240C YGL149WP53116 101 aa2.23□□□□□ -2.05
CUS1YMR240C FIT1Q04433 528 aa2.23□□□□□ -2.05
CUS1YMR240C RIF1P29539 1916 aa2.23□□□□□ -2.05
CUS1YMR240C HSP150P32478 413 aa2.22□□□□□ -2.05
CUS1YMR240C EMP24P32803 203 aaKnown RBP2.22□□□□□ -2.05
CUS1YMR240C MRPL11P36521 249 aaPredicted RBP2.22□□□□□ -2.05
CUS1YMR240C IPT1P38954 527 aa2.22□□□□□ -2.05
CUS1YMR240C YPL067CQ02754 198 aa2.22□□□□□ -2.05
CUS1YMR240C COA3Q3E7B2 85 aa2.22□□□□□ -2.05
CUS1YMR240C AQY2P0CD90 149 aa2.21□□□□□ -2.06
CUS1YMR240C GTT1P40582 234 aa2.21□□□□□ -2.06
CUS1YMR240C CMC4Q3E7A9 73 aa2.21□□□□□ -2.06
CUS1YMR240C YOS1Q3E834 85 aa2.21□□□□□ -2.06
CUS1YMR240C UBR1P19812 1950 aa2.21□□□□□ -2.06
CUS1YMR240C PRE1P22141 198 aaKnown RBP2.2□□□□□ -2.06
CUS1YMR240C YCL042WP25572 119 aa2.2□□□□□ -2.06
CUS1YMR240C YFL051CP43552 160 aa2.2□□□□□ -2.06
CUS1YMR240C TAR1Q8TGM6 124 aa2.2□□□□□ -2.06
CUS1YMR240C RPL36BO14455 100 aaKnown RBP2.19□□□□□ -2.06
CUS1YMR240C RPL36AP05745 100 aaPredicted RBP2.19□□□□□ -2.06
CUS1YMR240C VMA21P41806 77 aa2.19□□□□□ -2.06
CUS1YMR240C HUR1P45820 110 aa2.19□□□□□ -2.06
CUS1YMR240C AVO2Q04749 426 aa2.19□□□□□ -2.06
CUS1YMR240C YPL261CQ08976 102 aa2.19□□□□□ -2.06
CUS1YMR240C DAD1Q12248 94 aa2.19□□□□□ -2.06
CUS1YMR240C COA6Q3E846 104 aa2.19□□□□□ -2.06
CUS1YMR240C UBC4P15731 148 aa2.18□□□□□ -2.06
CUS1YMR240C YER187WP40102 141 aa2.18□□□□□ -2.06
CUS1YMR240C YCR075W-AQ3E830 75 aa2.18□□□□□ -2.06
CUS1YMR240C MHF1Q3E835 90 aa2.18□□□□□ -2.06
CUS1YMR240C OST5Q92316 86 aa2.18□□□□□ -2.06
CUS1YMR240C LYS2P07702 1392 aa2.18□□□□□ -2.06
CUS1YMR240C RTC6O14464 93 aa2.17□□□□□ -2.06
CUS1YMR240C YBR242WP38331 238 aa2.17□□□□□ -2.06
CUS1YMR240C MIC10Q96VH5 97 aa2.17□□□□□ -2.06
CUS1YMR240C MOT1P32333 1867 aa2.17□□□□□ -2.06
CUS1YMR240C ECM29P38737 1868 aa2.17□□□□□ -2.06
CUS1YMR240C YHR212W-AP0CX91 67 aa2.17□□□□□ -2.06
CUS1YMR240C KSH1Q8TGJ3 72 aa2.17□□□□□ -2.06
CUS1YMR240C LAA1P39526 2014 aa2.16□□□□□ -2.06
CUS1YMR240C FIG2P25653 1609 aa2.16□□□□□ -2.06
CUS1YMR240C PFY1P07274 126 aa2.16□□□□□ -2.06
CUS1YMR240C YJL197C-AP0C5P0 93 aa2.16□□□□□ -2.06
CUS1YMR240C YHR130CP38834 111 aa2.16□□□□□ -2.06
CUS1YMR240C NHP10Q03435 203 aa2.16□□□□□ -2.06
CUS1YMR240C YLR296WQ05898 108 aa2.16□□□□□ -2.06
CUS1YMR240C RSF2P46974 1380 aa2.15□□□□□ -2.07
CUS1YMR240C RPL40AP0CH08 128 aaKnown RBP2.15□□□□□ -2.07
CUS1YMR240C RPL40BP0CH09 128 aaKnown RBP2.15□□□□□ -2.07
CUS1YMR240C RPL22BP56628 122 aaKnown RBP2.15□□□□□ -2.07
CUS1YMR240C YIL014C-AQ02598 104 aa2.15□□□□□ -2.07
CUS1YMR240C MIX14Q04341 121 aa2.15□□□□□ -2.07
CUS1YMR240C HPA2Q06592 156 aa2.15□□□□□ -2.07
CUS1YMR240C VAM10Q08474 114 aa2.15□□□□□ -2.07
CUS1YMR240C YHR213WP0CI67 198 aa2.14□□□□□ -2.07
CUS1YMR240C SNN1P48232 102 aa2.14□□□□□ -2.07
CUS1YMR240C PAU12P53343 120 aa2.14□□□□□ -2.07
CUS1YMR240C FIT3Q08907 204 aa2.14□□□□□ -2.07
CUS1YMR240C SED1Q01589 338 aa2.13□□□□□ -2.07
CUS1YMR240C ROM2P51862 1356 aaKnown RBP2.12□□□□□ -2.07
CUS1YMR240C ATG8P38182 117 aaRIP-Chip data2.12□□□□□ -2.07not detected
CUS1YMR240C YBR027CP38220 110 aa2.12□□□□□ -2.07
CUS1YMR240C SNU13P39990 126 aaKnown RBP2.12□□□□□ -2.07
CUS1YMR240C YLR194CQ05777 254 aa2.12□□□□□ -2.07
CUS1YMR240C YPR203WQ08994 102 aa2.12□□□□□ -2.07
CUS1YMR240C PCC1Q3E833 88 aa2.12□□□□□ -2.07
CUS1YMR240C RPL33AP05744 107 aaKnown RBP2.11□□□□□ -2.07
CUS1YMR240C PAU2P32612 120 aa2.11□□□□□ -2.07
CUS1YMR240C YIR020CP40575 100 aa2.11□□□□□ -2.07
CUS1YMR240C LST8P41318 303 aa2.11□□□□□ -2.07
CUS1YMR240C YKL068W-AQ3E826 78 aa2.11□□□□□ -2.07
CUS1YMR240C YGL014C-AP0C5N1 53 aa2.1□□□□□ -2.07
CUS1YMR240C PAU19P0CE85 124 aa2.1□□□□□ -2.07
CUS1YMR240C PAU3P25610 124 aa2.1□□□□□ -2.07
CUS1YMR240C SRX1P36077 127 aa2.1□□□□□ -2.07
CUS1YMR240C MSL1P40567 111 aaPredicted RBP2.1□□□□□ -2.07
CUS1YMR240C RSM19P53733 91 aaPredicted RBP2.1□□□□□ -2.07
CUS1YMR240C YDR029WQ12111 104 aa2.1□□□□□ -2.07
CUS1YMR240C YGL194C-AQ2V2P6 80 aa2.1□□□□□ -2.07
CUS1YMR240C YMR122CQ03879 124 aa2.09□□□□□ -2.08
CUS1YMR240C SCP1Q08873 200 aa2.09□□□□□ -2.08
CUS1YMR240C FLO1P32768 1537 aa2.08□□□□□ -2.08
CUS1YMR240C PAU24P38155 120 aa2.08□□□□□ -2.08
CUS1YMR240C COX23P38824 151 aa2.08□□□□□ -2.08
CUS1YMR240C POR2P40478 281 aa2.08□□□□□ -2.08
CUS1YMR240C EMC5P40540 141 aa2.08□□□□□ -2.08
CUS1YMR240C YLR363W-AQ3E747 85 aa2.08□□□□□ -2.08
CUS1YMR240C SRB6P32570 121 aa2.07□□□□□ -2.08
CUS1YMR240C YHR138CP38841 114 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms