RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W YCL001W-BQ96VH2 84 aa2.31□□□□□ -2.04
CSM3YMR048W YPR010C-AA5Z2X5 72 aa2.3□□□□□ -2.04
CSM3YMR048W NTF2P33331 125 aaKnown RBP2.3□□□□□ -2.04
CSM3YMR048W SEC72P39742 193 aaKnown RBP2.3□□□□□ -2.04
CSM3YMR048W MIC26P50087 233 aa2.3□□□□□ -2.04
CSM3YMR048W ERV14P53173 138 aa2.3□□□□□ -2.04
CSM3YMR048W BRP1P53194 125 aa2.3□□□□□ -2.04
CSM3YMR048W THG1P53215 237 aaKnown RBP2.3□□□□□ -2.04
CSM3YMR048W TOM7P53507 60 aa2.3□□□□□ -2.04
CSM3YMR048W SGF11Q03067 99 aa2.3□□□□□ -2.04
CSM3YMR048W AIM34Q03673 198 aa2.3□□□□□ -2.04
CSM3YMR048W GPI19Q04082 140 aa2.3□□□□□ -2.04
CSM3YMR048W TVP18Q04767 167 aa2.3□□□□□ -2.04
CSM3YMR048W CNL1Q06333 122 aa2.3□□□□□ -2.04
CSM3YMR048W YOR011W-AQ3E807 68 aa2.3□□□□□ -2.04
CSM3YMR048W Q0255P03881 472 aa2.29□□□□□ -2.04
CSM3YMR048W YAR029WP39549 74 aa2.29□□□□□ -2.04
CSM3YMR048W SNU13P39990 126 aaKnown RBP2.29□□□□□ -2.04
CSM3YMR048W GLE2P40066 365 aa2.29□□□□□ -2.04
CSM3YMR048W YER135CP40082 130 aa2.29□□□□□ -2.04
CSM3YMR048W YIL163CP40448 117 aa2.29□□□□□ -2.04
CSM3YMR048W AGE2P40529 298 aa2.29□□□□□ -2.04
CSM3YMR048W VPS71Q03433 280 aa2.29□□□□□ -2.04
CSM3YMR048W YBR013CP38215 129 aa2.28□□□□□ -2.04
CSM3YMR048W SPC1P46965 94 aa2.28□□□□□ -2.04
CSM3YMR048W PMP3P87284 55 aa2.28□□□□□ -2.04
CSM3YMR048W RGM1Q00453 211 aa2.28□□□□□ -2.04
CSM3YMR048W WIP1Q2V2P8 89 aa2.28□□□□□ -2.04
CSM3YMR048W YKR070WP36151 352 aaKnown RBP2.27□□□□□ -2.05
CSM3YMR048W MRPL28P36527 147 aa2.27□□□□□ -2.05
CSM3YMR048W NSE4P43124 402 aa2.27□□□□□ -2.05
CSM3YMR048W TOS6P48560 102 aa2.27□□□□□ -2.05
CSM3YMR048W CYT2Q00873 224 aa2.27□□□□□ -2.05
CSM3YMR048W CUE4Q04201 117 aaPredicted RBP2.27□□□□□ -2.05
CSM3YMR048W YLR050CQ12155 161 aaKnown RBP2.27□□□□□ -2.05
CSM3YMR048W YBR200W-AQ3E755 54 aa2.27□□□□□ -2.05
CSM3YMR048W TAR1Q8TGM6 124 aa2.27□□□□□ -2.05
CSM3YMR048W PFY1P07274 126 aa2.26□□□□□ -2.05
CSM3YMR048W MRP49P32388 137 aa2.26□□□□□ -2.05
CSM3YMR048W YER076CP40049 302 aa2.26□□□□□ -2.05
CSM3YMR048W YMR141CP40211 102 aa2.26□□□□□ -2.05
CSM3YMR048W LSM8P47093 109 aaKnown RBP2.26□□□□□ -2.05
CSM3YMR048W MGR2Q02889 113 aa2.26□□□□□ -2.05
CSM3YMR048W PKR1Q03880 122 aaKnown RBP2.26□□□□□ -2.05
CSM3YMR048W YOR268CQ08734 132 aa2.26□□□□□ -2.05
CSM3YMR048W YPR013CQ12145 317 aa2.26□□□□□ -2.05
CSM3YMR048W YOR008C-AQ3E7B9 74 aa2.26□□□□□ -2.05
CSM3YMR048W POR1P04840 283 aaKnown RBP2.25□□□□□ -2.05
CSM3YMR048W RPL27BP0C2H7 136 aaKnown RBP2.25□□□□□ -2.05
CSM3YMR048W FZF1P32805 299 aa2.25□□□□□ -2.05
CSM3YMR048W SSS1P35179 80 aa2.25□□□□□ -2.05
CSM3YMR048W YLR042CQ07990 161 aa2.25□□□□□ -2.05
CSM3YMR048W FSF1Q12029 327 aaKnown RBP2.25□□□□□ -2.05
CSM3YMR048W FYV7Q12247 151 aa2.25□□□□□ -2.05
CSM3YMR048W YMR122W-AQ3E842 84 aa2.25□□□□□ -2.05
CSM3YMR048W YCR023CP25351 611 aa2.24□□□□□ -2.05
CSM3YMR048W APS1P35181 156 aa2.24□□□□□ -2.05
CSM3YMR048W PAU16P35994 123 aa2.24□□□□□ -2.05
CSM3YMR048W ERG28P40030 148 aa2.24□□□□□ -2.05
CSM3YMR048W DCV1P43595 202 aa2.24□□□□□ -2.05
CSM3YMR048W TIM11P81449 96 aaPredicted RBP2.24□□□□□ -2.05
CSM3YMR048W ARL3Q02804 198 aa2.24□□□□□ -2.05
CSM3YMR048W DGA1Q08650 418 aa2.24□□□□□ -2.05
CSM3YMR048W URA2P07259 2214 aaKnown RBP2.23□□□□□ -2.05
CSM3YMR048W BPH1P25356 2167 aa2.23□□□□□ -2.05
CSM3YMR048W RPL26AP05743 127 aaKnown RBP2.23□□□□□ -2.05
CSM3YMR048W SEC4P07560 215 aaKnown RBP2.23□□□□□ -2.05
CSM3YMR048W HAP3P13434 144 aa2.23□□□□□ -2.05
CSM3YMR048W UBC5P15732 148 aa2.23□□□□□ -2.05
CSM3YMR048W PAM17P36147 197 aa2.23□□□□□ -2.05
CSM3YMR048W MRPL11P36521 249 aaPredicted RBP2.23□□□□□ -2.05
CSM3YMR048W YNL217WP40152 326 aa2.23□□□□□ -2.05
CSM3YMR048W YGR017WP53210 297 aa2.23□□□□□ -2.05
CSM3YMR048W RPL26BP53221 127 aaKnown RBP2.23□□□□□ -2.05
CSM3YMR048W YDR042CQ03205 200 aa2.23□□□□□ -2.05
CSM3YMR048W ENV10Q99382 181 aa2.23□□□□□ -2.05
CSM3YMR048W YCR001WP25347 104 aa2.22□□□□□ -2.05
CSM3YMR048W YKL044WP36092 106 aa2.22□□□□□ -2.05
CSM3YMR048W YBR090CP38253 122 aa2.22□□□□□ -2.05
CSM3YMR048W FYV4P38783 130 aaPredicted RBP2.22□□□□□ -2.05
CSM3YMR048W ARC15P40518 154 aaRIP-Chip data2.22□□□□□ -2.05not detected
CSM3YMR048W YML079WQ03629 201 aa2.22□□□□□ -2.05
CSM3YMR048W YMR175W-AQ3E766 64 aa2.22□□□□□ -2.05
CSM3YMR048W SCS22Q6Q595 175 aa2.22□□□□□ -2.05
CSM3YMR048W RTC6O14464 93 aa2.21□□□□□ -2.06
CSM3YMR048W QCR8P08525 94 aa2.21□□□□□ -2.06
CSM3YMR048W ATP5P09457 212 aa2.21□□□□□ -2.06
CSM3YMR048W GSP1P32835 219 aaKnown RBP2.21□□□□□ -2.06
CSM3YMR048W GSP2P32836 220 aaKnown RBP2.21□□□□□ -2.06
CSM3YMR048W PEX17P40155 199 aa2.21□□□□□ -2.06
CSM3YMR048W OST2P46964 130 aa2.21□□□□□ -2.06
CSM3YMR048W YJR146WP47174 117 aa2.21□□□□□ -2.06
CSM3YMR048W YGL034CP53186 121 aa2.21□□□□□ -2.06
CSM3YMR048W POP3P53833 195 aaPredicted RBP2.21□□□□□ -2.06
CSM3YMR048W CWC27Q02770 301 aa2.21□□□□□ -2.06
CSM3YMR048W YDL241WQ07738 123 aa2.21□□□□□ -2.06
CSM3YMR048W YDL085C-AQ3E7B7 68 aaKnown RBP2.21□□□□□ -2.06
CSM3YMR048W YPR014CQ6B0W2 109 aa2.21□□□□□ -2.06
CSM3YMR048W RPL33AP05744 107 aaKnown RBP2.2□□□□□ -2.06
CSM3YMR048W HMRA2P0CY13 119 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms