RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C NAT3Q06504 195 aa3.44□□□□□ -1.86
NMD4YLR363C RRT7Q07829 113 aa3.44□□□□□ -1.86
NMD4YLR363C DFM1Q12743 341 aaKnown RBP3.44□□□□□ -1.86
NMD4YLR363C ENV10Q99382 181 aa3.44□□□□□ -1.86
NMD4YLR363C RPL28P02406 149 aaKnown RBP3.43□□□□□ -1.86
NMD4YLR363C PAU1P0CE88 120 aa3.43□□□□□ -1.86
NMD4YLR363C PAU14P0CE89 120 aa3.43□□□□□ -1.86
NMD4YLR363C PAU6P0CE90 120 aa3.43□□□□□ -1.86
NMD4YLR363C PAU18P0CE91 120 aa3.43□□□□□ -1.86
NMD4YLR363C PAU8P0CE92 120 aa3.43□□□□□ -1.86
NMD4YLR363C PAU11P0CE93 120 aa3.43□□□□□ -1.86
NMD4YLR363C AGA2P32781 87 aa3.43□□□□□ -1.86
NMD4YLR363C PAU13P38725 120 aa3.43□□□□□ -1.86
NMD4YLR363C CYB5P40312 120 aa3.43□□□□□ -1.86
NMD4YLR363C ARP3P47117 449 aaKnown RBP3.43□□□□□ -1.86
NMD4YLR363C YGR039WP53225 103 aa3.43□□□□□ -1.86
NMD4YLR363C PAU4P53427 120 aa3.43□□□□□ -1.86
NMD4YLR363C PAU10Q03050 120 aa3.43□□□□□ -1.86
NMD4YLR363C PAU20Q08322 120 aa3.43□□□□□ -1.86
NMD4YLR363C YDR029WQ12111 104 aa3.43□□□□□ -1.86
NMD4YLR363C POC4Q12245 148 aaPredicted RBP3.43□□□□□ -1.86
NMD4YLR363C PAU9Q3E770 120 aa3.43□□□□□ -1.86
NMD4YLR363C YNL277W-AQ3E7Z0 62 aa3.43□□□□□ -1.86
NMD4YLR363C MPC2P38857 129 aa3.42□□□□□ -1.86
NMD4YLR363C CWP2P43497 92 aa3.42□□□□□ -1.86
NMD4YLR363C CAX4P53223 239 aa3.42□□□□□ -1.86
NMD4YLR363C YMR320WQ04897 101 aa3.42□□□□□ -1.86
NMD4YLR363C YOR015WQ12169 119 aa3.42□□□□□ -1.86
NMD4YLR363C YDR119W-AQ2V2P9 66 aa3.42□□□□□ -1.86
NMD4YLR363C MRPL38P35996 138 aaPredicted RBP3.41□□□□□ -1.86
NMD4YLR363C MRPL49P40858 161 aaPredicted RBP3.41□□□□□ -1.86
NMD4YLR363C HST4P53688 370 aa3.41□□□□□ -1.86
NMD4YLR363C COX12Q01519 83 aa3.41□□□□□ -1.86
NMD4YLR363C YMR103CQ04436 120 aa3.41□□□□□ -1.86
NMD4YLR363C SYM1Q06563 197 aa3.41□□□□□ -1.86
NMD4YLR363C PBP4Q07362 185 aaKnown RBP3.41□□□□□ -1.86
NMD4YLR363C UTP23Q12339 254 aaKnown RBP3.41□□□□□ -1.86
NMD4YLR363C RPS22BQ3E7Y3 130 aaKnown RBP3.41□□□□□ -1.86
NMD4YLR363C YBL112CQ3E7Y4 105 aa3.41□□□□□ -1.86
NMD4YLR363C YFL041W-AQ3E817 63 aa3.41□□□□□ -1.86
NMD4YLR363C HUG1Q6Q5K6 68 aa3.41□□□□□ -1.86
NMD4YLR363C MDN1Q12019 4910 aaKnown RBP3.4□□□□□ -1.86
NMD4YLR363C FMP49A0A023PZB3 126 aa3.4□□□□□ -1.87
NMD4YLR363C NHP2P32495 156 aaPredicted RBP3.4□□□□□ -1.87
NMD4YLR363C RPL14AP36105 138 aaKnown RBP3.4□□□□□ -1.87
NMD4YLR363C YKR045CP36138 183 aa3.4□□□□□ -1.87
NMD4YLR363C YGR219WP53307 113 aa3.4□□□□□ -1.87
NMD4YLR363C YLR042CQ07990 161 aa3.4□□□□□ -1.87
NMD4YLR363C YAL063C-AQ3E791 96 aa3.4□□□□□ -1.87
NMD4YLR363C YGL010WP25338 174 aa3.39□□□□□ -1.87
NMD4YLR363C YPS1P32329 569 aa3.39□□□□□ -1.87
NMD4YLR363C AUA1P32450 94 aa3.39□□□□□ -1.87
NMD4YLR363C TOM6P33448 61 aa3.39□□□□□ -1.87
NMD4YLR363C YRA2P36036 203 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
NMD4YLR363C YAR068WP39564 161 aa3.39□□□□□ -1.87
NMD4YLR363C LST8P41318 303 aa3.39□□□□□ -1.87
NMD4YLR363C SFT1P43682 97 aa3.39□□□□□ -1.87
NMD4YLR363C CPD1P53314 239 aa3.39□□□□□ -1.87
NMD4YLR363C YDR274CP87283 123 aa3.39□□□□□ -1.87
NMD4YLR363C YPR195CQ06594 109 aa3.39□□□□□ -1.87
NMD4YLR363C YAL067W-AQ8TGK6 75 aa3.39□□□□□ -1.87
NMD4YLR363C YPL229WQ99395 206 aa3.39□□□□□ -1.87
NMD4YLR363C NRG2P38082 220 aa3.38□□□□□ -1.87
NMD4YLR363C GPI2P46961 280 aa3.38□□□□□ -1.87
NMD4YLR363C DSK2P48510 373 aa3.38□□□□□ -1.87
NMD4YLR363C YGL118CP53132 145 aa3.38□□□□□ -1.87
NMD4YLR363C SME1Q12330 94 aaPredicted RBP3.38□□□□□ -1.87
NMD4YLR363C YGL258W-AQ3E740 77 aa3.38□□□□□ -1.87
NMD4YLR363C YHL018WP38744 120 aaPredicted RBP3.37□□□□□ -1.87
NMD4YLR363C SVP26P38869 228 aa3.37□□□□□ -1.87
NMD4YLR363C ARC18Q05933 178 aaKnown RBP3.37□□□□□ -1.87
NMD4YLR363C HPA2Q06592 156 aa3.37□□□□□ -1.87
NMD4YLR363C YOR105WQ08504 108 aa3.37□□□□□ -1.87
NMD4YLR363C RPS22AP0C0W1 130 aaKnown RBP3.36□□□□□ -1.87
NMD4YLR363C RPL2AP0CX45 254 aaKnown RBP3.36□□□□□ -1.87
NMD4YLR363C RPL2BP0CX46 254 aaKnown RBP3.36□□□□□ -1.87
NMD4YLR363C YHL042WP38729 150 aa3.36□□□□□ -1.87
NMD4YLR363C SNF11P38956 169 aa3.36□□□□□ -1.87
NMD4YLR363C KNH1P50112 268 aa3.36□□□□□ -1.87
NMD4YLR363C SCS22Q6Q595 175 aa3.36□□□□□ -1.87
NMD4YLR363C KSH1Q8TGJ3 72 aa3.36□□□□□ -1.87
NMD4YLR363C RPL18AP0CX49 186 aaKnown RBP3.35□□□□□ -1.87
NMD4YLR363C RPL18BP0CX50 186 aaKnown RBP3.35□□□□□ -1.87
NMD4YLR363C MRS4P23500 304 aa3.35□□□□□ -1.87
NMD4YLR363C YCR050CP25630 102 aa3.35□□□□□ -1.87
NMD4YLR363C AHT1P29589 182 aa3.35□□□□□ -1.87
NMD4YLR363C YKL044WP36092 106 aa3.35□□□□□ -1.87
NMD4YLR363C RRT1P38192 103 aa3.35□□□□□ -1.87
NMD4YLR363C YPL073CP40323 161 aa3.35□□□□□ -1.87
NMD4YLR363C POR2P40478 281 aa3.35□□□□□ -1.87
NMD4YLR363C SDS23P53172 527 aa3.35□□□□□ -1.87
NMD4YLR363C POP3P53833 195 aaPredicted RBP3.35□□□□□ -1.87
NMD4YLR363C SWT21P53873 357 aaPredicted RBP3.35□□□□□ -1.87
NMD4YLR363C IRC23Q08416 157 aa3.35□□□□□ -1.87
NMD4YLR363C YPL038W-AQ3E7B4 63 aa3.35□□□□□ -1.87
NMD4YLR363C IGO2Q9P305 131 aa3.35□□□□□ -1.87
NMD4YLR363C PAM17P36147 197 aa3.34□□□□□ -1.87
NMD4YLR363C YBL071CP38185 102 aa3.34□□□□□ -1.87
NMD4YLR363C YGR050CP53231 118 aa3.34□□□□□ -1.87
NMD4YLR363C YCR025CP25352 136 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms