RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W YLR342W-AQ3E810 57 aa3.01□□□□□ -1.93
RPP0YLR340W ADH3P07246 375 aaKnown RBP3□□□□□ -1.93
RPP0YLR340W PBI2P0CT04 75 aaKnown RBP3□□□□□ -1.93
RPP0YLR340W UBC5P15732 148 aa3□□□□□ -1.93
RPP0YLR340W YHR173CP38864 112 aa3□□□□□ -1.93
RPP0YLR340W SPC25P40014 221 aa3□□□□□ -1.93
RPP0YLR340W YIL059CP40520 121 aa3□□□□□ -1.93
RPP0YLR340W YGL230CP53074 147 aa3□□□□□ -1.93
RPP0YLR340W COF1Q03048 143 aaKnown RBP3□□□□□ -1.93
RPP0YLR340W YMR122W-AQ3E842 84 aa3□□□□□ -1.93
RPP0YLR340W DDR48P18899 430 aaKnown RBP2.99□□□□□ -1.93
RPP0YLR340W DAD4P69851 72 aa2.99□□□□□ -1.93
RPP0YLR340W DAD1Q12248 94 aa2.99□□□□□ -1.93
RPP0YLR340W UTP23Q12339 254 aaKnown RBP2.99□□□□□ -1.93
RPP0YLR340W YDR010CQ12426 110 aa2.99□□□□□ -1.93
RPP0YLR340W YIL134C-AQ45U18 67 aa2.99□□□□□ -1.93
RPP0YLR340W PAI3P01094 68 aa2.98□□□□□ -1.93
RPP0YLR340W RPL12AP0CX53 165 aaKnown RBP2.98□□□□□ -1.93
RPP0YLR340W RPL12BP0CX54 165 aa2.98□□□□□ -1.93
RPP0YLR340W INO4P13902 151 aa2.98□□□□□ -1.93
RPP0YLR340W YCR007CP25354 239 aa2.98□□□□□ -1.93
RPP0YLR340W ATG8P38182 117 aaRIP-Chip data2.98□□□□□ -1.93not detected
RPP0YLR340W OST2P46964 130 aa2.98□□□□□ -1.93
RPP0YLR340W OST3P48439 350 aa2.98□□□□□ -1.93
RPP0YLR340W SBH1P52870 82 aa2.98□□□□□ -1.93
RPP0YLR340W YDR029WQ12111 104 aa2.98□□□□□ -1.93
RPP0YLR340W TIM22Q12328 207 aa2.98□□□□□ -1.93
RPP0YLR340W KTI11Q3E840 82 aa2.98□□□□□ -1.93
RPP0YLR340W FMP49A0A023PZB3 126 aa2.97□□□□□ -1.93
RPP0YLR340W RPL14AP36105 138 aaKnown RBP2.97□□□□□ -1.93
RPP0YLR340W YPT10P38146 199 aa2.97□□□□□ -1.93
RPP0YLR340W YGR039WP53225 103 aa2.97□□□□□ -1.93
RPP0YLR340W CYT2Q00873 224 aa2.97□□□□□ -1.93
RPP0YLR340W YNR034W-AQ3E841 98 aa2.97□□□□□ -1.93
RPP0YLR340W RAD6P06104 172 aa2.96□□□□□ -1.94
RPP0YLR340W SEC4P07560 215 aaKnown RBP2.96□□□□□ -1.94
RPP0YLR340W HMRA1P0CY11 126 aa2.96□□□□□ -1.94
RPP0YLR340W CKS1P20486 150 aaKnown RBP2.96□□□□□ -1.94
RPP0YLR340W COX10P21592 462 aa2.96□□□□□ -1.94
RPP0YLR340W RPL16AP26784 199 aaKnown RBP2.96□□□□□ -1.94
RPP0YLR340W TEM1P38987 245 aa2.96□□□□□ -1.94
RPP0YLR340W PEX22P39718 180 aa2.96□□□□□ -1.94
RPP0YLR340W SFT1P43682 97 aa2.96□□□□□ -1.94
RPP0YLR340W TAD2P47058 250 aa2.96□□□□□ -1.94
RPP0YLR340W THG1P53215 237 aaKnown RBP2.96□□□□□ -1.94
RPP0YLR340W PMP3P87284 55 aa2.96□□□□□ -1.94
RPP0YLR340W VMA9Q3E7B6 73 aa2.96□□□□□ -1.94
RPP0YLR340W IGO2Q9P305 131 aa2.96□□□□□ -1.94
RPP0YLR340W MBF1O14467 151 aaKnown RBP2.95□□□□□ -1.94
RPP0YLR340W YKR070WP36151 352 aaKnown RBP2.95□□□□□ -1.94
RPP0YLR340W MRPL11P36521 249 aaPredicted RBP2.95□□□□□ -1.94
RPP0YLR340W SMP1P38128 452 aa2.95□□□□□ -1.94
RPP0YLR340W MIX23P38162 196 aa2.95□□□□□ -1.94
RPP0YLR340W YBR292CP38357 123 aa2.95□□□□□ -1.94
RPP0YLR340W ARC15P40518 154 aaRIP-Chip data2.95□□□□□ -1.94not detected
RPP0YLR340W YFL065CP43539 102 aa2.95□□□□□ -1.94
RPP0YLR340W YLR194CQ05777 254 aa2.95□□□□□ -1.94
RPP0YLR340W NAT3Q06504 195 aa2.95□□□□□ -1.94
RPP0YLR340W YPR203WQ08994 102 aa2.95□□□□□ -1.94
RPP0YLR340W YLR412C-AQ3E742 68 aa2.95□□□□□ -1.94
RPP0YLR340W YNL277W-AQ3E7Z0 62 aa2.95□□□□□ -1.94
RPP0YLR340W ACB1P31787 87 aa2.94□□□□□ -1.94
RPP0YLR340W ZRT1P32804 376 aa2.94□□□□□ -1.94
RPP0YLR340W VMA21P41806 77 aa2.94□□□□□ -1.94
RPP0YLR340W SMD3P43321 101 aaKnown RBP2.94□□□□□ -1.94
RPP0YLR340W YFR045WP43617 309 aa2.94□□□□□ -1.94
RPP0YLR340W PAU23Q07987 124 aa2.94□□□□□ -1.94
RPP0YLR340W NAT5Q08689 176 aa2.94□□□□□ -1.94
RPP0YLR340W YOR015WQ12169 119 aa2.94□□□□□ -1.94
RPP0YLR340W PAU17Q12370 124 aa2.94□□□□□ -1.94
RPP0YLR340W YBL112CQ3E7Y4 105 aa2.94□□□□□ -1.94
RPP0YLR340W QRI5P32344 111 aa2.93□□□□□ -1.94
RPP0YLR340W HOT13P36078 116 aa2.93□□□□□ -1.94
RPP0YLR340W YPL073CP40323 161 aa2.93□□□□□ -1.94
RPP0YLR340W YIL163CP40448 117 aa2.93□□□□□ -1.94
RPP0YLR340W YMR103CQ04436 120 aa2.93□□□□□ -1.94
RPP0YLR340W FZF1P32805 299 aa2.92□□□□□ -1.94
RPP0YLR340W RPL32P38061 130 aaKnown RBP2.92□□□□□ -1.94
RPP0YLR340W YBL081WP38180 368 aaKnown RBP2.92□□□□□ -1.94
RPP0YLR340W RPB11P38902 120 aa2.92□□□□□ -1.94
RPP0YLR340W MSL1P40567 111 aaPredicted RBP2.92□□□□□ -1.94
RPP0YLR340W SNA2P56508 79 aa2.92□□□□□ -1.94
RPP0YLR340W ADH1P00330 348 aaKnown RBP2.91□□□□□ -1.94
RPP0YLR340W YAL064WP39711 94 aa2.91□□□□□ -1.94
RPP0YLR340W AIM19P40502 157 aa2.91□□□□□ -1.94
RPP0YLR340W CWP2P43497 92 aa2.91□□□□□ -1.94
RPP0YLR340W ADD37Q03233 198 aa2.91□□□□□ -1.94
RPP0YLR340W ANT1Q06497 328 aa2.91□□□□□ -1.94
RPP0YLR340W SME1Q12330 94 aaPredicted RBP2.91□□□□□ -1.94
RPP0YLR340W ECM12O13529 151 aa2.9□□□□□ -1.95
RPP0YLR340W AQY1P0CD91 305 aa2.9□□□□□ -1.95
RPP0YLR340W ATP19P81451 68 aa2.9□□□□□ -1.95
RPP0YLR340W SHH4Q06236 168 aa2.9□□□□□ -1.95
RPP0YLR340W YOR105WQ08504 108 aa2.9□□□□□ -1.95
RPP0YLR340W SRP21P32342 167 aa2.89□□□□□ -1.95
RPP0YLR340W YHR140WP38842 239 aa2.89□□□□□ -1.95
RPP0YLR340W CYB5P40312 120 aa2.89□□□□□ -1.95
RPP0YLR340W RPC10P40422 70 aa2.89□□□□□ -1.95
RPP0YLR340W YGR164WP53291 111 aa2.89□□□□□ -1.95
RPP0YLR340W PAU4P53427 120 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms