RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PWP1	YLR196W	YOR343C	Q12484	108 aa		4.16	□□□□□ -1.74
PWP1	YLR196W	COA2	Q3E823	68 aa		4.16	□□□□□ -1.74
PWP1	YLR196W	RPL15A	P05748	204 aa	Known RBP	4.15	□□□□□ -1.74
PWP1	YLR196W	PIS1	P06197	220 aa	Known RBP	4.15	□□□□□ -1.74
PWP1	YLR196W	FPR2	P32472	135 aa		4.15	□□□□□ -1.74
PWP1	YLR196W	ICS3	P47034	131 aa		4.15	□□□□□ -1.74
PWP1	YLR196W	RPL15B	P54780	204 aa	Predicted RBP	4.15	□□□□□ -1.74
PWP1	YLR196W	YMR316C-A	I2HB70	103 aa		4.15	□□□□□ -1.75
PWP1	YLR196W	RPL11A	P0C0W9	174 aa	Known RBP	4.15	□□□□□ -1.75
PWP1	YLR196W	RPL42A	P0CX27	106 aa	Known RBP	4.15	□□□□□ -1.75
PWP1	YLR196W	RPL42B	P0CX28	106 aa	Known RBP	4.15	□□□□□ -1.75
PWP1	YLR196W	RSM18	P40033	138 aa		4.15	□□□□□ -1.75
PWP1	YLR196W	YOR186W	Q08560	144 aa		4.15	□□□□□ -1.75
PWP1	YLR196W	SMT3	Q12306	101 aa	Known RBP	4.15	□□□□□ -1.75
PWP1	YLR196W	RPL11B	Q3E757	174 aa	Predicted RBP	4.15	□□□□□ -1.75
PWP1	YLR196W	LDB16	P25587	256 aa		4.14	□□□□□ -1.75
PWP1	YLR196W	ERG2	P32352	222 aa		4.14	□□□□□ -1.75
PWP1	YLR196W	YKL097C	P34245	136 aa		4.14	□□□□□ -1.75
PWP1	YLR196W	MRPL39	P36533	70 aa		4.14	□□□□□ -1.75
PWP1	YLR196W	SIM1	P40472	476 aa		4.14	□□□□□ -1.75
PWP1	YLR196W	HUR1	P45820	110 aa		4.14	□□□□□ -1.75
PWP1	YLR196W	YGR050C	P53231	118 aa		4.14	□□□□□ -1.75
PWP1	YLR196W	YMR181C	Q03231	154 aa		4.14	□□□□□ -1.75
PWP1	YLR196W	ACC1	Q00955	2233 aa	Known RBP	4.13	□□□□□ -1.75
PWP1	YLR196W	HHF1	P02309	103 aa	Known RBP	4.13	□□□□□ -1.75
PWP1	YLR196W	YHR214C-D	P0CX93	97 aa		4.13	□□□□□ -1.75
PWP1	YLR196W	RPS27A	P35997	82 aa	Known RBP	4.13	□□□□□ -1.75
PWP1	YLR196W	RPL32	P38061	130 aa	Known RBP	4.13	□□□□□ -1.75
PWP1	YLR196W	YSY6	P38374	65 aa		4.13	□□□□□ -1.75
PWP1	YLR196W	RPS27B	P38711	82 aa		4.13	□□□□□ -1.75
PWP1	YLR196W	TDA2	P40045	126 aa		4.13	□□□□□ -1.75
PWP1	YLR196W	SPG1	P50088	95 aa		4.13	□□□□□ -1.75
PWP1	YLR196W	NRM1	P53718	249 aa		4.13	□□□□□ -1.75
PWP1	YLR196W	YDR274C	P87283	123 aa		4.13	□□□□□ -1.75
PWP1	YLR196W	YMR295C	Q03559	197 aa		4.13	□□□□□ -1.75
PWP1	YLR196W	POL2	P21951	2222 aa	Known RBP	4.13	□□□□□ -1.75
PWP1	YLR196W	RPS14A	P06367	137 aa	Known RBP	4.12	□□□□□ -1.75
PWP1	YLR196W	YSF3	P0C074	85 aa	Predicted RBP	4.12	□□□□□ -1.75
PWP1	YLR196W	ROX3	P25046	220 aa		4.12	□□□□□ -1.75
PWP1	YLR196W	HSP150	P32478	413 aa		4.12	□□□□□ -1.75
PWP1	YLR196W	RPS14B	P39516	138 aa	Known RBP	4.12	□□□□□ -1.75
PWP1	YLR196W	YAL064W	P39711	94 aa		4.12	□□□□□ -1.75
PWP1	YLR196W	WWM1	P43582	211 aa	Known RBP	4.12	□□□□□ -1.75
PWP1	YLR196W	PCP1	P53259	346 aa		4.12	□□□□□ -1.75
PWP1	YLR196W	CRH1	P53301	507 aa		4.12	□□□□□ -1.75
PWP1	YLR196W	IRC23	Q08416	157 aa		4.12	□□□□□ -1.75
PWP1	YLR196W	YDR246W-A	Q3E763	66 aa		4.12	□□□□□ -1.75
PWP1	YLR196W	DSE2	P38844	325 aa		4.12	□□□□□ -1.75
PWP1	YLR196W	ECO1	P43605	281 aa		4.12	□□□□□ -1.75
PWP1	YLR196W	IRC19	Q07843	230 aa		4.12	□□□□□ -1.75
PWP1	YLR196W	YPL261C	Q08976	102 aa		4.12	□□□□□ -1.75
PWP1	YLR196W	TAO3	P40468	2376 aa		4.1	□□□□□ -1.75
PWP1	YLR196W	DDR48	P18899	430 aa	Known RBP	4.1	□□□□□ -1.75
PWP1	YLR196W	YHR173C	P38864	112 aa		4.1	□□□□□ -1.75
PWP1	YLR196W	YHP1	Q04116	353 aa		4.1	□□□□□ -1.75
PWP1	YLR196W	PBA1	Q05778	276 aa		4.1	□□□□□ -1.75
PWP1	YLR196W	PPT2	Q12036	173 aa		4.1	□□□□□ -1.75
PWP1	YLR196W	YAL064W-B	O13512	126 aa		4.09	□□□□□ -1.75
PWP1	YLR196W	PFY1	P07274	126 aa		4.09	□□□□□ -1.75
PWP1	YLR196W	LST8	P41318	303 aa		4.09	□□□□□ -1.75
PWP1	YLR196W	HUG1	Q6Q5K6	68 aa		4.09	□□□□□ -1.75
PWP1	YLR196W	BEM2	P39960	2167 aa	Known RBP	4.09	□□□□□ -1.75
PWP1	YLR196W	RPL26A	P05743	127 aa	Known RBP	4.09	□□□□□ -1.76
PWP1	YLR196W	YHL005C	P38752	130 aa		4.09	□□□□□ -1.76
PWP1	YLR196W	FLO9	P39712	1322 aa		4.08	□□□□□ -1.76
PWP1	YLR196W	RPS8A	P0CX39	200 aa	Known RBP	4.08	□□□□□ -1.76
PWP1	YLR196W	RPS8B	P0CX40	200 aa	Known RBP	4.08	□□□□□ -1.76
PWP1	YLR196W	CTR2	P38865	189 aa		4.08	□□□□□ -1.76
PWP1	YLR196W	SPI1	P40092	148 aa		4.08	□□□□□ -1.76
PWP1	YLR196W	YPR108W-A	Q3E7B3	70 aa		4.08	□□□□□ -1.76
PWP1	YLR196W	YAL065C	O13511	128 aa		4.07	□□□□□ -1.76
PWP1	YLR196W	YER135C	P40082	130 aa		4.07	□□□□□ -1.76
PWP1	YLR196W	YFL051C	P43552	160 aa		4.07	□□□□□ -1.76
PWP1	YLR196W	YOL118C	Q08259	102 aa		4.07	□□□□□ -1.76
PWP1	YLR196W	YFR032C-B	Q8TGU2	87 aa		4.07	□□□□□ -1.76
PWP1	YLR196W	FYV5	P25585	152 aa		4.07	□□□□□ -1.76
PWP1	YLR196W	SRX1	P36077	127 aa		4.07	□□□□□ -1.76
PWP1	YLR196W	PET8	P38921	284 aa		4.07	□□□□□ -1.76
PWP1	YLR196W	YEL067C	P39978	195 aa		4.07	□□□□□ -1.76
PWP1	YLR196W	YIL163C	P40448	117 aa		4.07	□□□□□ -1.76
PWP1	YLR196W	AIM19	P40502	157 aa		4.07	□□□□□ -1.76
PWP1	YLR196W	CRC1	Q12289	327 aa		4.07	□□□□□ -1.76
PWP1	YLR196W	YOR314W	Q12506	109 aa		4.07	□□□□□ -1.76
PWP1	YLR196W	RPL23A	P0CX41	137 aa	Known RBP	4.06	□□□□□ -1.76
PWP1	YLR196W	RPL23B	P0CX42	137 aa	Known RBP	4.06	□□□□□ -1.76
PWP1	YLR196W	QCR9	P22289	66 aa		4.06	□□□□□ -1.76
PWP1	YLR196W	YGR269W	P40326	108 aa		4.06	□□□□□ -1.76
PWP1	YLR196W	YNR077C	P53758	84 aa		4.06	□□□□□ -1.76
PWP1	YLR196W	YMR007W	Q03675	126 aa		4.06	□□□□□ -1.76
PWP1	YLR196W	YOL014W	Q08110	124 aa		4.06	□□□□□ -1.76
PWP1	YLR196W	YOR192C-C	Q3E736	78 aa		4.06	□□□□□ -1.76
PWP1	YLR196W	YOR381W-A	Q3E804	55 aa		4.06	□□□□□ -1.76
PWP1	YLR196W	YGR121W-A	Q3E816	71 aa		4.06	□□□□□ -1.76
PWP1	YLR196W	YPI1	P43587	155 aa		4.05	□□□□□ -1.76
PWP1	YLR196W	IMP2	P46972	177 aa		4.05	□□□□□ -1.76
PWP1	YLR196W	ERI1	P62651	68 aa	Known RBP	4.05	□□□□□ -1.76
PWP1	YLR196W	AIM4	P38305	123 aa	Predicted RBP	4.04	□□□□□ -1.76
PWP1	YLR196W	YBR209W	P38311	105 aa		4.04	□□□□□ -1.76
PWP1	YLR196W	MTC6	P38849	526 aa		4.04	□□□□□ -1.76
PWP1	YLR196W	MIG3	P39943	394 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms