RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeast

Gene PAM17, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM17	YKR065C	YFL067W	P43537	175 aa		5.22	□□□□□ -1.57
PAM17	YKR065C	DCV1	P43595	202 aa		5.22	□□□□□ -1.57
PAM17	YKR065C	MGR2	Q02889	113 aa		5.22	□□□□□ -1.57
PAM17	YKR065C	UBC5	P15732	148 aa		5.21	□□□□□ -1.58
PAM17	YKR065C	MRP49	P32388	137 aa		5.21	□□□□□ -1.58
PAM17	YKR065C	YKR032W	P36127	104 aa		5.21	□□□□□ -1.58
PAM17	YKR065C	CDC40	P40968	455 aa	Predicted RBP	5.21	□□□□□ -1.58
PAM17	YKR065C	TOS6	P48560	102 aa		5.21	□□□□□ -1.58
PAM17	YKR065C	YMR122W-A	Q3E842	84 aa		5.2	□□□□□ -1.58
PAM17	YKR065C	COA6	Q3E846	104 aa		5.2	□□□□□ -1.58
PAM17	YKR065C	YER076C	P40049	302 aa		5.19	□□□□□ -1.58
PAM17	YKR065C	CUE4	Q04201	117 aa	Predicted RBP	5.19	□□□□□ -1.58
PAM17	YKR065C	FCF1	Q05498	189 aa	Predicted RBP	5.19	□□□□□ -1.58
PAM17	YKR065C	YOR008C-A	Q3E7B9	74 aa		5.19	□□□□□ -1.58
PAM17	YKR065C	SSS1	P35179	80 aa		5.18	□□□□□ -1.58
PAM17	YKR065C	PKR1	Q03880	122 aa	Known RBP	5.18	□□□□□ -1.58
PAM17	YKR065C	TRP1	P00912	224 aa		5.17	□□□□□ -1.58
PAM17	YKR065C	ARC15	P40518	154 aa	RIP-Chip data	5.17	□□□□□ -1.58	not detected
PAM17	YKR065C	YIL014C-A	Q02598	104 aa		5.17	□□□□□ -1.58
PAM17	YKR065C	CNL1	Q06333	122 aa		5.17	□□□□□ -1.58
PAM17	YKR065C	YPR014C	Q6B0W2	109 aa		5.17	□□□□□ -1.58
PAM17	YKR065C	RPL27B	P0C2H7	136 aa	Known RBP	5.16	□□□□□ -1.58
PAM17	YKR065C	PET8	P38921	284 aa		5.16	□□□□□ -1.58
PAM17	YKR065C	ERG28	P40030	148 aa		5.16	□□□□□ -1.58
PAM17	YKR065C	YJL028W	P47062	111 aa		5.16	□□□□□ -1.58
PAM17	YKR065C	MHR1	Q06630	226 aa		5.16	□□□□□ -1.58
PAM17	YKR065C	ADH2	P00331	348 aa	Known RBP	5.15	□□□□□ -1.59
PAM17	YKR065C	GSP1	P32835	219 aa	Known RBP	5.15	□□□□□ -1.59
PAM17	YKR065C	GSP2	P32836	220 aa	Known RBP	5.15	□□□□□ -1.59
PAM17	YKR065C	YAR029W	P39549	74 aa		5.15	□□□□□ -1.59
PAM17	YKR065C	CGR1	P53188	120 aa		5.15	□□□□□ -1.59
PAM17	YKR065C	YDR042C	Q03205	200 aa		5.15	□□□□□ -1.59
PAM17	YKR065C	DPP1	Q05521	289 aa		5.15	□□□□□ -1.59
PAM17	YKR065C	RTC6	O14464	93 aa		5.14	□□□□□ -1.59
PAM17	YKR065C	YNL200C	P40165	246 aa	Known RBP	5.14	□□□□□ -1.59
PAM17	YKR065C	YLR050C	Q12155	161 aa	Known RBP	5.14	□□□□□ -1.59
PAM17	YKR065C	RPL33A	P05744	107 aa	Known RBP	5.13	□□□□□ -1.59
PAM17	YKR065C	APS1	P35181	156 aa		5.13	□□□□□ -1.59
PAM17	YKR065C	YIL059C	P40520	121 aa		5.13	□□□□□ -1.59
PAM17	YKR065C	RPL33B	P41056	107 aa	Known RBP	5.13	□□□□□ -1.59
PAM17	YKR065C	YJR146W	P47174	117 aa		5.13	□□□□□ -1.59
PAM17	YKR065C	OST3	P48439	350 aa		5.13	□□□□□ -1.59
PAM17	YKR065C	RPL16A	P26784	199 aa	Known RBP	5.12	□□□□□ -1.59
PAM17	YKR065C	PAU16	P35994	123 aa		5.12	□□□□□ -1.59
PAM17	YKR065C	AIM29	P36154	155 aa		5.12	□□□□□ -1.59
PAM17	YKR065C	MRPL11	P36521	249 aa	Predicted RBP	5.12	□□□□□ -1.59
PAM17	YKR065C	YER134C	P40081	178 aa		5.12	□□□□□ -1.59
PAM17	YKR065C	POP3	P53833	195 aa	Predicted RBP	5.12	□□□□□ -1.59
PAM17	YKR065C	RPL31A	P0C2H8	113 aa	Known RBP	5.11	□□□□□ -1.59
PAM17	YKR065C	PRE1	P22141	198 aa	Known RBP	5.11	□□□□□ -1.59
PAM17	YKR065C	YBR209W	P38311	105 aa		5.11	□□□□□ -1.59
PAM17	YKR065C	ENV10	Q99382	181 aa		5.11	□□□□□ -1.59
PAM17	YKR065C	HMRA2	P0CY13	119 aa		5.1	□□□□□ -1.59
PAM17	YKR065C	YMR103C	Q04436	120 aa		5.08	□□□□□ -1.6
PAM17	YKR065C	YMR320W	Q04897	101 aa		5.08	□□□□□ -1.6
PAM17	YKR065C	YMR175W-A	Q3E766	64 aa		5.08	□□□□□ -1.6
PAM17	YKR065C	COA3	Q3E7B2	85 aa		5.08	□□□□□ -1.6
PAM17	YKR065C	YIL134C-A	Q45U18	67 aa		5.08	□□□□□ -1.6
PAM17	YKR065C	SVP26	P38869	228 aa		5.07	□□□□□ -1.6
PAM17	YKR065C	YEL008W	P40001	126 aa		5.07	□□□□□ -1.6
PAM17	YKR065C	YLL066W-B	Q8TGJ7	56 aa		5.07	□□□□□ -1.6
PAM17	YKR065C	YKL070W	P36087	169 aa		5.06	□□□□□ -1.6
PAM17	YKR065C	YGL088W	P53151	121 aa		5.06	□□□□□ -1.6
PAM17	YKR065C	BET5	Q03630	159 aa		5.06	□□□□□ -1.6
PAM17	YKR065C	FYV4	P38783	130 aa	Predicted RBP	5.05	□□□□□ -1.6
PAM17	YKR065C	RPC10	P40422	70 aa		5.05	□□□□□ -1.6
PAM17	YKR065C	HAC1	P41546	238 aa		5.05	□□□□□ -1.6
PAM17	YKR065C	LSM8	P47093	109 aa	Known RBP	5.05	□□□□□ -1.6
PAM17	YKR065C	FYV7	Q12247	151 aa		5.05	□□□□□ -1.6
PAM17	YKR065C	DFM1	Q12743	341 aa	Known RBP	5.05	□□□□□ -1.6
PAM17	YKR065C	YKL044W	P36092	106 aa		5.04	□□□□□ -1.6
PAM17	YKR065C	YDR115W	Q04598	105 aa		5.04	□□□□□ -1.6
PAM17	YKR065C	YLR194C	Q05777	254 aa		5.04	□□□□□ -1.6
PAM17	YKR065C	YER085C	P40058	173 aa		5.03	□□□□□ -1.6
PAM17	YKR065C	PEX17	P40155	199 aa		5.03	□□□□□ -1.6
PAM17	YKR065C	SEN15	Q04675	128 aa		5.03	□□□□□ -1.6
PAM17	YKR065C	YDL241W	Q07738	123 aa		5.03	□□□□□ -1.6
PAM17	YKR065C	TPT1	Q12272	230 aa	Known RBP	5.03	□□□□□ -1.6
PAM17	YKR065C	YAR023C	D6VPM8	179 aa		5.02	□□□□□ -1.61
PAM17	YKR065C	QCR8	P08525	94 aa		5.02	□□□□□ -1.61
PAM17	YKR065C	ATP15	P21306	62 aa		5.02	□□□□□ -1.61
PAM17	YKR065C	HAP3	P13434	144 aa		5.01	□□□□□ -1.61
PAM17	YKR065C	FUN14	P18411	198 aa		5.01	□□□□□ -1.61
PAM17	YKR065C	ANB1	P19211	157 aa		5.01	□□□□□ -1.61
PAM17	YKR065C	SHU1	P38751	150 aa		5.01	□□□□□ -1.61
PAM17	YKR065C	YPL261C	Q08976	102 aa		5.01	□□□□□ -1.61
PAM17	YKR065C	SEC11	P15367	167 aa		5	□□□□□ -1.61
PAM17	YKR065C	MSL1	P40567	111 aa	Predicted RBP	5	□□□□□ -1.61
PAM17	YKR065C	YGL230C	P53074	147 aa		5	□□□□□ -1.61
PAM17	YKR065C	AIM11	P87275	137 aa		5	□□□□□ -1.61
PAM17	YKR065C	YMR295C	Q03559	197 aa		5	□□□□□ -1.61
PAM17	YKR065C	YPL229W	Q99395	206 aa		5	□□□□□ -1.61
PAM17	YKR065C	ATP5	P09457	212 aa		4.99	□□□□□ -1.61
PAM17	YKR065C	CIN5	P40917	295 aa		4.99	□□□□□ -1.61
PAM17	YKR065C	COX14	P39103	70 aa		4.98	□□□□□ -1.61
PAM17	YKR065C	VTC1	P40046	129 aa	RIP-Chip data	4.98	□□□□□ -1.61	not detected
PAM17	YKR065C	ADH1	P00330	348 aa	Known RBP	4.97	□□□□□ -1.61
PAM17	YKR065C	MRPL44	P19956	98 aa		4.97	□□□□□ -1.61
PAM17	YKR065C	TOA2	P32774	122 aa		4.97	□□□□□ -1.61
PAM17	YKR065C	YKR041W	P36134	250 aa		4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms