RNA–Protein interactions for RNA: YKR026C

GCN3, Transcript of Alpha subunit of translation initiation factor eIF2B, yeast

Gene GCN3, Length 918 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCN3	YKR026C	Q0297	Q9ZZV8	51 aa		5.09	□□□□□ -1.59
GCN3	YKR026C	Q0255	P03881	472 aa		5.08	□□□□□ -1.6
GCN3	YKR026C	RPL16B	P26785	198 aa	Known RBP	5.08	□□□□□ -1.6
GCN3	YKR026C	CIN5	P40917	295 aa		5.08	□□□□□ -1.6
GCN3	YKR026C	YCH1	P42937	148 aa		5.08	□□□□□ -1.6
GCN3	YKR026C	YOL085C	Q99345	113 aa		5.08	□□□□□ -1.6
GCN3	YKR026C	RPS8A	P0CX39	200 aa	Known RBP	5.07	□□□□□ -1.6
GCN3	YKR026C	RPS8B	P0CX40	200 aa	Known RBP	5.07	□□□□□ -1.6
GCN3	YKR026C	NHP2	P32495	156 aa	Predicted RBP	5.07	□□□□□ -1.6
GCN3	YKR026C	DUT1	P33317	147 aa		5.07	□□□□□ -1.6
GCN3	YKR026C	YPT53	P36019	220 aa		5.07	□□□□□ -1.6
GCN3	YKR026C	SOH1	P38633	127 aa		5.07	□□□□□ -1.6
GCN3	YKR026C	YER135C	P40082	130 aa		5.07	□□□□□ -1.6
GCN3	YKR026C	CAX4	P53223	239 aa		5.07	□□□□□ -1.6
GCN3	YKR026C	SCW10	Q04951	389 aa		5.07	□□□□□ -1.6
GCN3	YKR026C	YLR194C	Q05777	254 aa		5.07	□□□□□ -1.6
GCN3	YKR026C	YPR013C	Q12145	317 aa		5.07	□□□□□ -1.6
GCN3	YKR026C	YOR097C	Q12274	175 aa	Predicted RBP	5.07	□□□□□ -1.6
GCN3	YKR026C	TRP1	P00912	224 aa		5.06	□□□□□ -1.6
GCN3	YKR026C	YCL042W	P25572	119 aa		5.06	□□□□□ -1.6
GCN3	YKR026C	YJR146W	P47174	117 aa		5.06	□□□□□ -1.6
GCN3	YKR026C	MRPS8	Q03799	155 aa		5.06	□□□□□ -1.6
GCN3	YKR026C	YMR244W	Q04018	355 aa		5.06	□□□□□ -1.6
GCN3	YKR026C	PEX17	P40155	199 aa		5.05	□□□□□ -1.6
GCN3	YKR026C	YNR077C	P53758	84 aa		5.05	□□□□□ -1.6
GCN3	YKR026C	LSM6	Q06406	86 aa	Known RBP	5.05	□□□□□ -1.6
GCN3	YKR026C	YLR042C	Q07990	161 aa		5.05	□□□□□ -1.6
GCN3	YKR026C	RPL15A	P05748	204 aa	Known RBP	5.04	□□□□□ -1.6
GCN3	YKR026C	ATP15	P21306	62 aa		5.04	□□□□□ -1.6
GCN3	YKR026C	RPL16A	P26784	199 aa	Known RBP	5.04	□□□□□ -1.6
GCN3	YKR026C	MIG3	P39943	394 aa		5.04	□□□□□ -1.6
GCN3	YKR026C	YEL067C	P39978	195 aa		5.04	□□□□□ -1.6
GCN3	YKR026C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.04	□□□□□ -1.6	not detected
GCN3	YKR026C	MET32	Q12041	191 aa		5.04	□□□□□ -1.6
GCN3	YKR026C	URA2	P07259	2214 aa	Known RBP	5.04	□□□□□ -1.6
GCN3	YKR026C	YDL022C-A	P0C5L6	82 aa		5.03	□□□□□ -1.6
GCN3	YKR026C	RPB9	P27999	122 aa		5.03	□□□□□ -1.6
GCN3	YKR026C	YER085C	P40058	173 aa		5.03	□□□□□ -1.6
GCN3	YKR026C	SIM1	P40472	476 aa		5.03	□□□□□ -1.6
GCN3	YKR026C	YFR057W	P43625	151 aa		5.03	□□□□□ -1.6
GCN3	YKR026C	ALG13	P53178	202 aa		5.03	□□□□□ -1.6
GCN3	YKR026C	MSA1	Q08471	629 aa		5.03	□□□□□ -1.6
GCN3	YKR026C	MRPL23	Q12487	163 aa	Predicted RBP	5.03	□□□□□ -1.6
GCN3	YKR026C	YER145C-A	A0A023PYF4	145 aa		5.02	□□□□□ -1.61
GCN3	YKR026C	RPL18A	P0CX49	186 aa	Known RBP	5.02	□□□□□ -1.61
GCN3	YKR026C	RPL18B	P0CX50	186 aa	Known RBP	5.02	□□□□□ -1.61
GCN3	YKR026C	CYC7	P00045	113 aa		5.01	□□□□□ -1.61
GCN3	YKR026C	RPL2A	P0CX45	254 aa	Known RBP	5.01	□□□□□ -1.61
GCN3	YKR026C	RPL2B	P0CX46	254 aa	Known RBP	5.01	□□□□□ -1.61
GCN3	YKR026C	ATX1	P38636	73 aa		5.01	□□□□□ -1.61
GCN3	YKR026C	YAR029W	P39549	74 aa		5.01	□□□□□ -1.61
GCN3	YKR026C	VHS2	P40463	436 aa		5.01	□□□□□ -1.61
GCN3	YKR026C	PMP3	P87284	55 aa		5.01	□□□□□ -1.61
GCN3	YKR026C	HPA2	Q06592	156 aa		5.01	□□□□□ -1.61
GCN3	YKR026C	QCR8	P08525	94 aa		5	□□□□□ -1.61
GCN3	YKR026C	RPS11A	P0CX47	156 aa	Known RBP	5	□□□□□ -1.61
GCN3	YKR026C	RPS11B	P0CX48	156 aa	Known RBP	5	□□□□□ -1.61
GCN3	YKR026C	CDC43	P18898	376 aa		5	□□□□□ -1.61
GCN3	YKR026C	YBR209W	P38311	105 aa		5	□□□□□ -1.61
GCN3	YKR026C	RRT13	P40042	185 aa		5	□□□□□ -1.61
GCN3	YKR026C	YCL021W-A	Q96VH3	125 aa		5	□□□□□ -1.61
GCN3	YKR026C	RPL28	P02406	149 aa	Known RBP	4.99	□□□□□ -1.61
GCN3	YKR026C	YCR041W	P37265	110 aa		4.99	□□□□□ -1.61
GCN3	YKR026C	SHU1	P38751	150 aa		4.99	□□□□□ -1.61
GCN3	YKR026C	VTC1	P40046	129 aa	RIP-Chip data	4.99	□□□□□ -1.61	not detected
GCN3	YKR026C	PPT2	Q12036	173 aa		4.99	□□□□□ -1.61
GCN3	YKR026C	YBR126W-A	Q8TGU7	68 aa		4.99	□□□□□ -1.61
GCN3	YKR026C	UGX2	P32772	223 aa		4.98	□□□□□ -1.61
GCN3	YKR026C	MPC2	P38857	129 aa		4.98	□□□□□ -1.61
GCN3	YKR026C	OST2	P46964	130 aa		4.98	□□□□□ -1.61
GCN3	YKR026C	YCR075W-A	Q3E830	75 aa		4.98	□□□□□ -1.61
GCN3	YKR026C	YHR130C	P38834	111 aa		4.97	□□□□□ -1.61
GCN3	YKR026C	YEL008W	P40001	126 aa		4.97	□□□□□ -1.61
GCN3	YKR026C	YIL059C	P40520	121 aa		4.97	□□□□□ -1.61
GCN3	YKR026C	TAR1	Q8TGM6	124 aa		4.97	□□□□□ -1.61
GCN3	YKR026C	NRG2	P38082	220 aa		4.96	□□□□□ -1.62
GCN3	YKR026C	MRPS12	P53732	153 aa		4.96	□□□□□ -1.62
GCN3	YKR026C	UBC5	P15732	148 aa		4.95	□□□□□ -1.62
GCN3	YKR026C	COX10	P21592	462 aa		4.95	□□□□□ -1.62
GCN3	YKR026C	YFR035C	P43608	114 aa		4.95	□□□□□ -1.62
GCN3	YKR026C	YPS5	P53057	165 aa		4.95	□□□□□ -1.62
GCN3	YKR026C	YGL088W	P53151	121 aa		4.95	□□□□□ -1.62
GCN3	YKR026C	YCR085W	P25650	117 aa		4.94	□□□□□ -1.62
GCN3	YKR026C	YBR144C	P34215	104 aa		4.94	□□□□□ -1.62
GCN3	YKR026C	FIP1	P45976	327 aa		4.94	□□□□□ -1.62
GCN3	YKR026C	YDL186W	P48568	277 aa		4.94	□□□□□ -1.62
GCN3	YKR026C	EOS1	P53938	366 aa		4.94	□□□□□ -1.62
GCN3	YKR026C	YHR212W-A	P0CX91	67 aa		4.93	□□□□□ -1.62
GCN3	YKR026C	INO4	P13902	151 aa		4.93	□□□□□ -1.62
GCN3	YKR026C	RPA12	P32529	125 aa	Known RBP	4.93	□□□□□ -1.62
GCN3	YKR026C	MID2	P36027	376 aa		4.93	□□□□□ -1.62
GCN3	YKR026C	ARC15	P40518	154 aa	RIP-Chip data	4.93	□□□□□ -1.62	not detected
GCN3	YKR026C	YNL190W	P53872	204 aa		4.93	□□□□□ -1.62
GCN3	YKR026C	ERI1	P62651	68 aa	Known RBP	4.93	□□□□□ -1.62
GCN3	YKR026C	KRE9	P39005	276 aa		4.92	□□□□□ -1.62
GCN3	YKR026C	YIA6	P40556	373 aa		4.92	□□□□□ -1.62
GCN3	YKR026C	ABF2	Q02486	183 aa		4.92	□□□□□ -1.62
GCN3	YKR026C	YGR240C-A	Q3E786	66 aa		4.92	□□□□□ -1.62
GCN3	YKR026C	MSN1	P22148	382 aa		4.91	□□□□□ -1.62
GCN3	YKR026C	YMR122W-A	Q3E842	84 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms